Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0732 ATGCAACACGGAGACTATAGCTCATCTCCTTATTATCAATTCCCTCAGACGCAGAACCCAATTCCCAATCCTAATCCCAACCCTAACCCTATCCCTCCCGATTCAGTGCCGAACCAGTACGCCTCCGCGCCCCCTTTCATCTCTGATTACTCGCCTTACGCCTCTACTTATCCTCCATACCCTCAAAATCCCGATCCCATGTCAGTTCCTCCCACTGCTCCTTCGTACCCTCCAACCTCCAACCCTAATTTGAACTCTTTAAGTTCTCCTCCTCAGCCCTCCTCTTTTCCTCCGTTTGAGTCCCATGTCCCGTATCAACCACCTCCACAACAACAATGTCAATATCCCCCGTATGATCAACATCAAACGACTCCAGGTTATGCCCCTTCCTCATCTGCAATCCCTCCCAACACCGCCCCGAATTCTTTAACCTCGTCTTTCTATCCGGCTTCGTACACTCATCCTGGATCATCGATTCCCCCGACATACGAAAGTCTGTATGAGAATTCCGTGAAATTTGATTATGGCGGTGCTTATGTCGATGACAAATATGGAAGTTTTAATCGGAGCCGGTCTGATTTGGGGTCTGATTTGTATGGAAAGCGACCGGATACGAGGCATGATACTGTTCGTGAGGATATTTATGGAGATGGTGTGTATGCCTATAGAGGGGTGGAAACGGAACCATATGGAGCGCGGGGTACGGCTTCTAAGTCTTCAACATGGTCCGGTTTTGATGATTATGGAAGGTCAATTAGTTTTCCCTCTGCGAAGGAACCCTCTTTTTCAAACAAGGTTGTGAAAGCTGTGCCGAAGGCTGATCCCCAAGAGGATGTTAAAAGCGGAGTGCAAAAATTTCGGGTCAAGCTATTGGCAGAAAGTGGTGGTCAGAGCACTATGGATGTGCTCTGTCAGATTGCTTTGGATGGAATTCGTATGCTGGATCCAAGTACCAGCCGGACATTGAGAATTTATCCTCTCGAGAACATCGCGAGATGTGAAAAATTCGATTCGACCACCCTTGCATTTTGGTCCAAGAGTCCAGTTGACATTGAGCCAAGACGAATCAGACTGCAATCCAATAGCTACACCACCAACACTCTGTTGGATACAGTTACGGCTGCAACCATACAGTTCAAGGAAATGGGTGGAAGTAGGAGGCCTGCTGAATCATTGAAAACTAATGAACAACCTATAGAAAAGAAGAAAGGCATTGTTGATTGGATGAATCTGGTTAAACCTGCGAATGAGGAGAAAGATCATTGGGTCCCGGATGAAGCAGTTTCAAAATGCACAGCATGTGGGACTGATTTTGGGGCTTTTGTTCGTAAGCATCACTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGCACACATGGCAGAATTCCTCTAACTGCTGATGAGAATGCTCAGCCAGTACGAGTTTGTGACCGATGCATGGCAGAAGTGACACAGAGGCTCAGTAATGCTAAAGAGGCTGCAAACAAGCCTGTATTGCAAAGTCATGAGGATCTTGCAAGAAAACTCCAGGAGGAGCTGGAGAGGAATCGGAGGACATCAGGTTCCAAGTCTGATGGATCGGGAAGACGGATGAAGGAAGTTGAATGCCCTACTTGCACAGTCCATCTGCAGGTCCAAGTACCTAGCTCAGGTTCAGAGACCATTGAGTGTGGGGTTTGCCAGCACCCATTTCTTGTGAGCGTTTGA 1710 0.4725 MQHGDYSSSPYYQFPQTQNPIPNPNPNPNPIPPDSVPNQYASAPPFISDYSPYASTYPPYPQNPDPMSVPPTAPSYPPTSNPNLNSLSSPPQPSSFPPFESHVPYQPPPQQQCQYPPYDQHQTTPGYAPSSSAIPPNTAPNSLTSSFYPASYTHPGSSIPPTYESLYENSVKFDYGGAYVDDKYGSFNRSRSDLGSDLYGKRPDTRHDTVREDIYGDGVYAYRGVETEPYGARGTASKSSTWSGFDDYGRSISFPSAKEPSFSNKVVKAVPKADPQEDVKSGVQKFRVKLLAESGGQSTMDVLCQIALDGIRMLDPSTSRTLRIYPLENIARCEKFDSTTLAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPAESLKTNEQPIEKKKGIVDWMNLVKPANEEKDHWVPDEAVSKCTACGTDFGAFVRKHHCRNCGDIFCDKCTHGRIPLTADENAQPVRVCDRCMAEVTQRLSNAKEAANKPVLQSHEDLARKLQEELERNRRTSGSKSDGSGRRMKEVECPTCTVHLQVQVPSSGSETIECGVCQHPFLVSV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0732 569 MobiDBLite consensus disorder prediction 57 78 - -
Prci8g0732 569 MobiDBLite consensus disorder prediction 115 144 - -
Prci8g0732 569 PANTHER PROTEIN FREE1 1 568 IPR045893 GO:0036258|GO:0043130
Prci8g0732 569 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 425 485 IPR017455 -
Prci8g0732 569 SUPERFAMILY FYVE/PHD zinc finger 420 491 IPR011011 -
Prci8g0732 569 Pfam FYVE zinc finger 421 485 IPR000306 GO:0046872
Prci8g0732 569 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 411 490 IPR013083 -
Prci8g0732 569 SMART fyve_4 417 486 IPR000306 GO:0046872
Prci8g0732 569 MobiDBLite consensus disorder prediction 1 144 - -
Prci8g0732 569 MobiDBLite consensus disorder prediction 1 16 - -
Prci8g0732 569 Coils Coil 500 520 - -
Prci8g0732 569 MobiDBLite consensus disorder prediction 17 39 - -
Prci8g0732 569 MobiDBLite consensus disorder prediction 91 114 - -
Prci8g0732 569 FunFam Zinc finger, FYVE-type, endofin 412 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0732 Prci-Chr8 4697866 4707213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0732 413 498 EF-hand Containing Proteins AT3G14270 35.052 7.82e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0732 - - qsa:O6P43_018705 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0732 8 4697866 4707213 Prci8g0732 8 4697866 4707213 ECH