Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0408 ATGGGCCGCCACTCGCTATTGGCTCTCTTGCTCTTTTCCCTCCTATCAGCCGCGGTCGCAACGGCGGAGGGCATCGACGATGAAGATGATCTCCTGATACGGCAAGTGGTGACGGACAACGACGATCACTTGCTTAACGCCGAACACCATTTCTCCTCCTTCAAAATCAAGTTCGGCAAAATCTACGCTACTAGAGAGGAGCACGACTATCGTTTCGGTGTCTTCAAGGCTAACTTGCGCCGGGCTAGGTTACACCAGAAACTTGATCCATCCGCCGTCCACGGCATCACAAAATTTTCCGATCTTACTCCCTCGGAATTTCGCCGGCAGTTCCTCGGCCTTAAGCCACTTCGTCTTCCCGCCGATGCTCAAAAGGCTCCAATCCTCCCTACAAACGATCTTCCTACGGACTTCGACTGGCGAGATCGTGGAGCAGTCACCGGCGTCAAGGACCAGGCATCGTGTGGATCGTGTTGGTCGTTTAGCACCACAGGGGCGTTGGAAGGAGCTCATTTTCTAGCGACGGGCGAGCTTGAGAGCCTTAGTGAGCAACAGCTAGTGGATTGCGACCATGAGTGTGATCCAGAAGAAGCTGGAGCATGTGATGCAGGCTGCAACGGTGGGTTGATGACCTCTGCATTCGAATATACTCTCAAGGCCGGTGGGCTGGTGCGAGAAGAAGACTATCCTTACACGGGAACAGACCGTGGTACCTGCAAATTTGATAAAAGCAAAATTGCTGCTTCCGTGGCTAATTTCTCTGTGATTTCCATGGACGAAGATCAAATTGCTGCAAATTTGGTGAAGCATGGCCCTCTTGCAGTTGGTATCAATGCAGTTTTTATGCAGACGTACATAGGCGGCGTTTCATGCCCATACATATGCGGAAAGCATTTGGATCACGGGGTTCTTCTGGTGGGCTACGGGTCTGCCGGTTATGCCCCCATTCGCTTCAAGGAAAAGCCCTACTGGATCATCAAGAATTCATGGGGAGCCAACTGGGGAGAGAATGGGTATTACAAAATCTGCAGAGGTCGTAACGTGTGTGGAGTGGATTCCATGGTCTCAAGCGTGGCTGCTGTGAGTACTTCTGCACACTCTTCTTAA 1107 0.5167 MGRHSLLALLLFSLLSAAVATAEGIDDEDDLLIRQVVTDNDDHLLNAEHHFSSFKIKFGKIYATREEHDYRFGVFKANLRRARLHQKLDPSAVHGITKFSDLTPSEFRRQFLGLKPLRLPADAQKAPILPTNDLPTDFDWRDRGAVTGVKDQASCGSCWSFSTTGALEGAHFLATGELESLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYTLKAGGLVREEDYPYTGTDRGTCKFDKSKIAASVANFSVISMDEDQIAANLVKHGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGANWGENGYYKICRGRNVCGVDSMVSSVAAVSTSAHSS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0408 368 Pfam Cathepsin propeptide inhibitor domain (I29) 51 107 IPR013201 -
Prci8g0408 368 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 299 309 IPR025660 -
Prci8g0408 368 SUPERFAMILY Cysteine proteinases 48 358 IPR038765 -
Prci8g0408 368 PRINTS Papain cysteine protease (C1) family signature 323 329 IPR000668 GO:0006508|GO:0008234
Prci8g0408 368 PRINTS Papain cysteine protease (C1) family signature 301 311 IPR000668 GO:0006508|GO:0008234
Prci8g0408 368 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Prci8g0408 368 Pfam Papain family cysteine protease 134 357 IPR000668 GO:0006508|GO:0008234
Prci8g0408 368 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 152 163 IPR000169 -
Prci8g0408 368 FunFam Cysteine protease RD19A 31 359 - -
Prci8g0408 368 SMART Inhibitor_I29_2 51 107 IPR013201 -
Prci8g0408 368 Gene3D Cysteine proteinases 25 359 - -
Prci8g0408 368 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 323 342 IPR025661 -
Prci8g0408 368 CDD Peptidase_C1A 135 358 IPR039417 -
Prci8g0408 368 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 46 352 IPR013128 GO:0008234
Prci8g0408 368 SMART pept_c1 134 359 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0408 Prci-Chr8 2578192 2581210 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0408 K01373 - gmx:100778716 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0408 8 2578192 2581210 Prci8g0408 8 2578192 2581210 ECH