Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0403 ATGGCCGATGAAGGACAAGTCATTAGCTGTCACACTGTTGAATCCTGGAAGGAGCAGCTTGAGAAGGGTAACGAATCCAAAAAACTGATTGTGGTGGATTTCACTGCTTCTTGGTGCGGTCCATGCCGCTTCATTGCCCCAATTTTGGCAGAGATTGCCAAGAAGATGACCAATGTCACCTTTCTTAAGGTTGATGTGGATGAATTGAAGTCTGTTTCTGAGGAATGGGGCATCGAGGCTATGCCAACCTTCCTGTTCCTGAAAGAAGGCAAGTTAGTGGATAAGGTTGTGGGTGCTAAGAAGGAGGAGCTGCAATTGACCATAGCGAAGCATGCAACTGCTGCTGCCTGA 351 0.4758 MADEGQVISCHTVESWKEQLEKGNESKKLIVVDFTASWCGPCRFIAPILAEIAKKMTNVTFLKVDVDELKSVSEEWGIEAMPTFLFLKEGKLVDKVVGAKKEELQLTIAKHATAAA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0403 116 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Prci8g0403 116 PANTHER THIOREDOXIN 7 110 - -
Prci8g0403 116 CDD TRX_family 18 103 - -
Prci8g0403 116 PRINTS Thioredoxin family signature 38 47 - -
Prci8g0403 116 PRINTS Thioredoxin family signature 30 38 - -
Prci8g0403 116 PRINTS Thioredoxin family signature 77 88 - -
Prci8g0403 116 SUPERFAMILY Thioredoxin-like 5 111 IPR036249 -
Prci8g0403 116 Pfam Thioredoxin 9 109 IPR013766 -
Prci8g0403 116 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Prci8g0403 116 NCBIfam thioredoxin 23 110 IPR005746 GO:0015035
Prci8g0403 116 FunFam Thioredoxin 6 113 - -
Prci8g0403 116 Gene3D Glutaredoxin 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0403 Prci-Chr8 2534881 2536771 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0403 K03671 - gmx:100499879 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0403 8 2534881 2536771 Prci8g0403 8 2534881 2536771 ECH