Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0402 ATGGAAACTAACTCGGTCTCCAGGCTGCTGCTGTTTTGCTTGACGGTCTGTCTTGTGAGTTCTGAGCTCGCACACTGCACAGTCACTTACGATAGAAAGGCTATTATCATCAATGGCCAAAGAAGAATCCTCATTTCCGGATCCATTCACTATCCCAGAAGCACCCCTGAAATGTGGGAAGATCTTATTCGGAAGGCCAGACATGGAGGCCTCGATGTCATTGACACTTATGTTTTCTGGGATGTCCATGAACCCTCTCCTGGCAAGTACAATTTTGAAGGGAGGTACGATCTGGTACGGTTCATTAAGACTGTGCAGAAAGTGGGGCTCTATGTTCATCTTCGCATCGGGCCTTATGTATGCGCCGAGTGGAACTTTGGAGGATTCCCTGTTTGGCTTAAGTATGCTCCTGGCATGAGCTTCAGGACGAACAATGGACCTTTCAAGGCCGCAATGCAAGGATTCACCCAGAAGATTGTGCAGATGATGAAGAATGAAAAGCTTTTTCAATCTCAGGGTGGTCCAATCATTCTCTCTCAGATTGAGAACGAGTATGGACCAGAGAGTAGGGCACTTGGTGCTGCTGGTCACGCATATGTAAATTGGGCTGCACATATGGCTGCTGGATTGGGTACAGGAGTCCCATGGGTGATGTGCAAGGAAGACGACGCTCCAGATCCTGTGATAAATACATGTAATGGCTTTTACTGCGATGAATTCTCTCCAAATAAACCCTACAAGCCTAGCCTCTGGACCGAGGCTTGGAGTGGCTGGTTTACAGAATTTGGGGGTCCAATTCACCAGCGACCAGTTCAAGATCTAGCATTTGCCGTTGCGCGTTTCATACAAAAGGGTGGTTCATTCGTAAATTACTACATGTACCACGGAGGAACTAACTTTGGGCGCTCAGCTGGAGGTCCATTCATCACCACCAGCTACGACTATGATGCTCCCATCGATGAATACGGTCTAACAAGACAACCTAAATACACTCATTTGAAGGATCTTCATCAAGCTATTAAGCGATGCGAACATGCTCTGGTTTCTTCTGATCCAACTGTTACATCTTTAGGAAGGTTCCAGCAGGCGCATTTGTTCTCTTCAGGAAGAACATGTGCAGCTTTTCTTGCAAACTATGATGCAAACTCAGCTGCCAGGGTAATGTTCAATAACAGACGCTATGATTTGCCACCTTGGTCCATAAGCATCCTCCCTGACTGTAGAACTGATGTATTTAACACAGCAAGAGTGAGAGTTCAAACGTCACAGATAAAAATGTTGCCTACCAATTCTAAGTTCTTCTCATGGGAGACCTACGATGAGGATCTATCTTCTCCGGCGGATGGTTCAGGTACAAGTATGGTATCTGCTGGACTCCTGGATCAGATAGACGTTACTAGAGATAGAAGCGACTATCTATGGTACACAACCAGCGTTGACATAAGTTCATCAGAATCATTTCTTAAAGGAGGACACAGACCCAGCATTAGCGTACAGTCTGCTGGTCATGCTGTTCACGTGTTTGTGAATGGGCAGTTTATCGGGTCGGCTTTTGGAACGAGAGAACAGAGACGTTGCACGTTTAATGCACCCATCAACCTTCATGCTGGAACTAATAAAATTGCTCTTCTCAGCGTAGCCGTGGGATTGCCGAATGTTGGCCTGCATTTTGAAACATGGAAGACAGGGATCACCGGTCCAGTAATGCTGCACGGTCTTGACAAGGAAAACAAAGACTTAACGCGGCAGAAATGGTCTTATCAGGTTGGGCTAAAGGGAGAGTCAACGAACTTGGCGTCTCCCGACGGAATCTCATCCGTTGAATGGGTCCAAGATTCACTGGCCACCCAAACACGTCAGCATTTGAAATGGCACAAGGCATATTTCAATGCGCCTGTGGGGAACGAACCATTGGCTTTGGACTTGTCCAGTATGGGAAAGGGTCAAGTATGGATCAACGGGCAAAGCATAGGAAGATATTGGACGGCTTATGCGAAGGGTAACTGCAATACCTGTAGCTACGAAAACACATTCCGACCCGTTAAATGCCAGCTTGGTTGTGGGCAACCCACACAACGATGGTACCACGTTCCGAGGTCGTGGTTGAAGGCAACGAAGAATTTGATAGTAATATTTGAAGAGTTAGGTGGAAATCCTTGGAAAATATCCCTAGTAAAGAGAACAGCACATACTCCAAAGTCTACTAAATCGGATTCAGAGAACTGA 2226 0.4641 METNSVSRLLLFCLTVCLVSSELAHCTVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIRKARHGGLDVIDTYVFWDVHEPSPGKYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYAPGMSFRTNNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESRALGAAGHAYVNWAAHMAAGLGTGVPWVMCKEDDAPDPVINTCNGFYCDEFSPNKPYKPSLWTEAWSGWFTEFGGPIHQRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLTRQPKYTHLKDLHQAIKRCEHALVSSDPTVTSLGRFQQAHLFSSGRTCAAFLANYDANSAARVMFNNRRYDLPPWSISILPDCRTDVFNTARVRVQTSQIKMLPTNSKFFSWETYDEDLSSPADGSGTSMVSAGLLDQIDVTRDRSDYLWYTTSVDISSSESFLKGGHRPSISVQSAGHAVHVFVNGQFIGSAFGTREQRRCTFNAPINLHAGTNKIALLSVAVGLPNVGLHFETWKTGITGPVMLHGLDKENKDLTRQKWSYQVGLKGESTNLASPDGISSVEWVQDSLATQTRQHLKWHKAYFNAPVGNEPLALDLSSMGKGQVWINGQSIGRYWTAYAKGNCNTCSYENTFRPVKCQLGCGQPTQRWYHVPRSWLKATKNLIVIFEELGGNPWKISLVKRTAHTPKSTKSDSEN 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0402 741 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Prci8g0402 741 Gene3D Glycosidases 25 343 - -
Prci8g0402 741 PANTHER BETA-GALACTOSIDASE RELATED 20 732 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Prci8g0402 741 SUPERFAMILY Galactose-binding domain-like 584 729 IPR008979 -
Prci8g0402 741 Gene3D - 451 586 - -
Prci8g0402 741 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Prci8g0402 741 SUPERFAMILY Galactose-binding domain-like 401 574 IPR008979 -
Prci8g0402 741 Gene3D - 595 733 - -
Prci8g0402 741 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Prci8g0402 741 FunFam Beta-galactosidase 292 419 - -
Prci8g0402 741 FunFam Beta-galactosidase 448 584 - -
Prci8g0402 741 FunFam Beta-galactosidase 23 343 - -
Prci8g0402 741 FunFam Beta-galactosidase 592 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0402 Prci-Chr8 2529071 2533691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0402 4 729 Glycoside Hydrolase AT4G36360 71.978 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0402 - - gmx:100818981 1286.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0402 8 2529071 2533691 Prci8g0402 8 2529071 2533691 ECH