Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0206 ATGGGAAGTCTTAGTTGTAATCATCACTTGATTGAAATTCTCCTCCTCCTTGCAGCACTCCTGTTGCACATTTCGTCTCAGTCAGCAACATGTGGCTCGATTGTCAAGTCTCTTCCTGGCTTCCAGGGACCGCTCCCTTTTGTTTTAGAGACAGGGTATGTTGGAGTTGGTGAAACAGGGGATGTGCAGCTGTTTTACTACTTTATCGAGTCACAGAACAATCCCAGAGATGACCCTCTCATGCTCTGGCTGACCGGCGGACCCGGTTGCTCTGGAATTTCGGGTCTCGCTTTTGAAATTGGTCCCGTTGGATTTCGAAACCAGGAATACAATGGGAGCGTGCCTGATCTTGTCTTGAGACCCAGTTCTTGGACAGAGGTGAGCAGCATCATATTCGTAGATTTGCCTGCTGGTACCGGCTTCTCTTACTCCAGAACCATCCAGCAAGGTGACTGGATAACAATTCATCATGCCCATCAATTTCTCAGGAAGTGGCTGATTGATCACCAAGAGTTCCTGACCAATAAAGTATATATCGGCGGCGACTCCTACTCCGGCATTACTCTCCCTGGGATTGTTGAAGAGATATCAAATGGAAATGAAGCTGGTGTCCAGCCCCGGATAAACCTTCAGTCACTTCAAAATAGTTGCGGGGGAGAGTATACAAGCATAGACCCCAAAAATTTAAACTGTGTCAGAGATATGCAGTCCTTCCAAAAGTGCATTTCAGGAATTAATTTTGCCCATATCTTGGAACCCCTATGCGAATTCGCATTGCAAAAGCCATTTGATGAGATTTCTTGGAGAAAATATTTCACTTACAAGCCCAGGGCAGTTCTCGAATCTCATCTCTCAGTGCCACCCTTAAGCTGCCGGACGTATGCTTATTTCCTATGTGGTTACTGGGCCAACCACCCCGATGTTCGCAAGGCGCTGGGTATCCGAGAGGGAAGTATAGGGAAATGGCAGCGTTGTGAAAATAGAAACTACAAGTTCGAGATCAATGGGTCTTTGGAATATCATATGAATCTTAGCAGAAAAGGCTATCGTTCTTTGATCTACAGTGGCGATCATGACATGATGGTTCCTTTCTTGGACACTCAAGCCTGGATAAGATCTTTGAATTACTCTATCGTGGATGACTGGAGGCCATGGGATACTAATGGCCAGGTTGCAGGATACACGAGGTCTTATTCCAATCAAATGACATTTGCAACCGTGAAGGGTGGAGGACATACAGCTCCAGAATACAAGCGTGAAGAATGTTTTGCCATGTTCAGTCGATGGATATCTAATGGACCTTTGTAG 1308 0.4587 MGSLSCNHHLIEILLLLAALLLHISSQSATCGSIVKSLPGFQGPLPFVLETGYVGVGETGDVQLFYYFIESQNNPRDDPLMLWLTGGPGCSGISGLAFEIGPVGFRNQEYNGSVPDLVLRPSSWTEVSSIIFVDLPAGTGFSYSRTIQQGDWITIHHAHQFLRKWLIDHQEFLTNKVYIGGDSYSGITLPGIVEEISNGNEAGVQPRINLQSLQNSCGGEYTSIDPKNLNCVRDMQSFQKCISGINFAHILEPLCEFALQKPFDEISWRKYFTYKPRAVLESHLSVPPLSCRTYAYFLCGYWANHPDVRKALGIREGSIGKWQRCENRNYKFEINGSLEYHMNLSRKGYRSLIYSGDHDMMVPFLDTQAWIRSLNYSIVDDWRPWDTNGQVAGYTRSYSNQMTFATVKGGGHTAPEYKREECFAMFSRWISNGPL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0206 435 Pfam Serine carboxypeptidase 39 213 IPR001563 GO:0004185|GO:0006508
Prci8g0206 435 Gene3D - 292 435 - -
Prci8g0206 435 FunFam Carboxypeptidase 337 432 - -
Prci8g0206 435 FunFam Carboxypeptidase 290 434 - -
Prci8g0206 435 Gene3D alpha/beta hydrolase 30 263 IPR029058 -
Prci8g0206 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Prci8g0206 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Prci8g0206 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Prci8g0206 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Prci8g0206 435 SUPERFAMILY alpha/beta-Hydrolases 35 433 IPR029058 -
Prci8g0206 435 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 419 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0206 Prci-Chr8 1254998 1259677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0206 29 58 Calmodulin-binding Proteins AT2G22960 70.000 1.42e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0206 K16296 - gmx:100792006 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0206 8 1254998 1259677 Prci8g0206 8 1254998 1259677 ECH