Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0184 ATGAAAATGGCGTCTATAAAAGCTAGTCAAGACTGTCACGGCCAAGACTCACCCTATTTTCTGGGGTGGGAGGAGTACGAGAAGAATCCTTATCACCCCATCGGAAATCCTTCCGGAATCATTCAGATGGGACTCGCAGAGAATCAGTTGTCGTTCGACATAGTTGAGGCATGGCTGGAGAGAAATCCGGAGACACTTGGGTTGAAGAAAGATGGAGTATCGGCCTTCAGAGAACTTGCCCTCTTCCAGGATTATCATGGCTTACCCTCTTTCAAAGACGCACTGGTGAAATTCTTGGCAAAAATAAGAGGGAACAGAGTAAAATTTGGTTCAGGCAGACTCGTCCTCACTGCGGGTGCTACATCCGCCAATGAGATTCTCATGTTCTGCCTTGCTGACCCAGGCGAAGCTTTTCTTCTTCCCACTCCCTACTACCCTGCATTTGATAGAGATCTAAAGTGGAGGACTGGGGTCGAAATAGTTCCCATACATTGCTCAAGCTCAAATGGGTTCAGAATAACTCCCACTGCCCTGGAGCAAGCCTATGAACAAGCCCGATCGCGGAATCTAAACGTTAAAGGGGTCTTAGTTACTAACCCCTCCAATCCTCTGGGCATAACCTTGAGCAGAACAGAGCTGAACCTTCTCCTGGATTTCGCCATCGAGAAGAAGGTTCATATCATAAGCGACGAAATTTATTCGGGCACAGTCTTCGACTCTCCCAGATTCATAAGCATCATGGAAGTGGCGAATGAAAAGACCATTGACGACGATGGGGTGTGGAGCCGCGTTCACGTCGTTTATAGCCTGTCAAAGGACCTTGGCCTGCCAGGATTTCGAGTAGGCATGATCTACTCAAATAGCCACGTGGTGGTGGCCGCAGCCACAAAAATGTCAAGCTTCGGACTGGTGTCCTCGCAAACTCAGTACCTGCTGGCGAACTTACTCTCCGACGATAGTTTCACAGAGGAATACATGAAGGAGACTCAGAGGAGACTGAAAAAGCGAAGGGAGATGCTGGTTTCTGGGTTGACAAAAGCAGGGATTAGGTGTCTGAAGAGCAACGCTGGGCTGTTCTGCTGGGTGGACATGAGGCATCTGTTATGGTCAGACAGTTTTGAAGCAGAGAAGGAGCTTTGGAAGAGGATTCTTATGGAGGTTGGCCTGAACATATCTCCGGGTTCATCGTGCCACTGCTCTGAACCGGGCTGGTTCAGGGTTTGCTTTGCCGATATGTCTGAGAACACATTACAAGTTGCAATGCGACGATTGAAGGTGTTTGCTGCTTCAATAGTGTCTGCTTCTGGTAGTAGAATCAGTAATTCCGAGAGGTCACTCGGCAGGTGGGTTTCCCAGTTATCACCATCCTGTGACTGGGAAGCTGACACTTATTTCTGA 1398 0.4864 MKMASIKASQDCHGQDSPYFLGWEEYEKNPYHPIGNPSGIIQMGLAENQLSFDIVEAWLERNPETLGLKKDGVSAFRELALFQDYHGLPSFKDALVKFLAKIRGNRVKFGSGRLVLTAGATSANEILMFCLADPGEAFLLPTPYYPAFDRDLKWRTGVEIVPIHCSSSNGFRITPTALEQAYEQARSRNLNVKGVLVTNPSNPLGITLSRTELNLLLDFAIEKKVHIISDEIYSGTVFDSPRFISIMEVANEKTIDDDGVWSRVHVVYSLSKDLGLPGFRVGMIYSNSHVVVAAATKMSSFGLVSSQTQYLLANLLSDDSFTEEYMKETQRRLKKRREMLVSGLTKAGIRCLKSNAGLFCWVDMRHLLWSDSFEAEKELWKRILMEVGLNISPGSSCHCSEPGWFRVCFADMSENTLQVAMRRLKVFAASIVSASGSRISNSERSLGRWVSQLSPSCDWEADTYF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0184 465 SUPERFAMILY PLP-dependent transferases 12 427 IPR015424 -
Prci8g0184 465 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 269 282 IPR004838 GO:0003824|GO:0009058|GO:0030170
Prci8g0184 465 Gene3D - 63 318 IPR015421 GO:0003824
Prci8g0184 465 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 291 423 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 43 69 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 225 248 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 295 318 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 76 92 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 189 213 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 135 156 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 113 133 - -
Prci8g0184 465 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 263 287 - -
Prci8g0184 465 Pfam Aminotransferase class I and II 41 424 IPR004839 GO:0009058|GO:0030170
Prci8g0184 465 CDD AAT_like 77 425 - -
Prci8g0184 465 Gene3D Aspartate Aminotransferase, domain 1 29 423 IPR015422 GO:0003824
Prci8g0184 465 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 10 425 - -
Prci8g0184 465 FunFam 1-aminocyclopropane-1-carboxylate synthase 3 63 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0184 Prci-Chr8 1130527 1133632 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0184 K01762 - gmx:100803507 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0184 8 1130527 1133632 Prci8g0184 8 1130527 1133632 ECH