Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0181 ATGCCGACTGATTACATGTACGTGGCCAAGTGCAGCGAGGCCAACTTTGGACGAGGGCAACTCAGTCTTTTCGGGAACATTCAACTGAGCCCATCTGCTGGAGTTCTAAACTACGGCCAAGGATTATTTGAAGGCACAAAAGCATACAGAAAGGAAAATGGGCACCTACTCCTGTTTCGACCAGAACAAAATGCCATGCGCATGCAGGCAGGGGCAGAAAGAATGTGCATGGCAGCACCGTCCGTGGATCAGTTTGTGAATGCTCTCAAGCAAACTGCCCTGGCTAATAGGCGCTGGGTTCCACCACCGAGGAAGGGATCATTGTACCTCAGGCCTCTGCTCATAGGAACGGGTCCTGTATTGGGTTTGGCCCCAGCACCTGAGTATACATTCCTTGTATATGCTTCCCCTGTTGGAAACTATTTCAAGGAGGGTTCGGCGCCGCTTAACTTGTACGTGGAGGAGGACTTTGATCGCGCTTCTCGTCGCGGAACCGGAAGCGTCAAAACCATTTCAAATTACGCTCCAGTACTAATGGCACAAATGAGAGCAAAGAACAGGGGATTTTCAGACGTGCTGTACCTGGACTCACAGACCAAGAAACATCTGGAGGAGGTGTCCTCCTGTAACATTTTTATTGCCAAGGGCAAAAACATCTCAACACCAGCCACCAACGGAACCATTCTCGCTGGAATCACCAGAACAAGTGTCATTGAAATTGCTCGTGATCATGGCTACCAGGTGGAGGAGCGTGCGGTTGGAGTGGATGAATTAGCGGAGGCCGATGAAGTTTTCTGCACTGGAACTGCCGTTGGTGTTGCCCCTGTAGGCACCATCACGTATAGAGACACAAGGATGGAATATAAAACTGGCAGTGGAACTATTTGTCAAGAGCTGTGTTCCACCCTCACCGGCATTCAGACAGGAAATATTGAAGATAGCAAAGGGTGGGTCCACGAGATTTACTGA 969 0.4985 MPTDYMYVAKCSEDXNFGRGQLSLFGNIQLSPSAGVLNYGQGLFEGTKAYRKENGHLLLFRPEQNAMRMQAGAERMCMAAPSVDQFVNALKQTALANRRWVPPPRKGSLYLRPLLIGTGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYVEEDFDRASRRGTGSVKTISNYAPVLMAQMRAKNRGFSDVLYLDSQTKKHLEEVSSCNIFIAKGKNISTPATNGTILAGITRTSVIEIARDHGYQVEERAVGVDELAEADEVFCTGTAVGVAPVGTITYRDTRMEYKTGSGTICQELCSTLTGIQTGNIEDSKGWVHEIY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0181 323 Gene3D - 151 322 IPR043132 -
Prci8g0181 323 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 2 319 IPR036038 GO:0003824
Prci8g0181 323 PIRSF BCAT1 1 323 IPR005786 GO:0004084|GO:0009081
Prci8g0181 323 Pfam Amino-transferase class IV 42 279 IPR001544 GO:0003824
Prci8g0181 323 FunFam Branched-chain-amino-acid aminotransferase 151 322 - -
Prci8g0181 323 ProSitePatterns Aminotransferases class-IV signature. 206 235 IPR018300 GO:0003824
Prci8g0181 323 FunFam Branched-chain-amino-acid aminotransferase 1 149 - -
Prci8g0181 323 NCBIfam branched-chain-amino-acid transaminase 20 321 IPR005786 GO:0004084|GO:0009081
Prci8g0181 323 Gene3D - 1 150 IPR043131 -
Prci8g0181 323 PANTHER AMINO ACID AMINOTRANSFERASE 1 322 IPR005786 GO:0004084|GO:0009081
Prci8g0181 323 CDD BCAT_beta_family 29 310 IPR033939 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0181 Prci-Chr8 1107567 1109724 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0181 K00826 - gmx:100782644 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0181 8 1107567 1109724 Prci8g0181 8 1107567 1109724 ECH