Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0170 ATGAATTTCTTTTCATCTTCCCTCATCGTCTTCCTCGTCGCATCCCTCTCCGGTGCGGCTTTTGCTGGTCGAGACCTCGATGGAGGCATTATCCGGTTGCCTTCGGAAGTTACGACGTTCTTCCGCCGAGGTCGCACGGAGGAGGGGAACCGAAACGCCGAGACCGAGGGAACGAAGTGGGCTGTTTTGATCGCTGGTTCCAGCGGCTACTGGAATTACAGGCACCAGTCGGATGTTTGTCATGCGTATCAACTTCTGAGGAAAGGTGGCCTGAAAGAAGAAAATATTATTGTGCTTATGTACGATGATATTGCTTTCAACGAAGAGAATCCAAGGCCTGGAATTATCATTAACAGTCCAGATGGGGGTGATGTTTATAAAGGAGTTCCAAAGGATTACACTGGTGAAGATGTTACTGTTAATAATTTTTTCGCTGTTATACTTGGAAATAAGTCAGCTCTTACTGGTGGCAGTGGGAAGGTTGTGGATAGTGGTCCCAATGACCATATATTTATATACTACACCGATCATGGTGGCCCAGGAGTGCTTGGGATGCCTACTAGTCCTTACTTATATGCAAATGATCTTATTGAAGTTTTGAAAAAGAAGCATGCTTCTGGAGGGTATAAAAGCCTAGTATTTTACCTCGAGGCTTGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTTTGAATATTTATGCTACAACAGCTTCAAATGCAGATGAAAGCAGTTGGGGAACTTACTGCCCTGGGGAGTATCCTAGTCCTCCCCCAGAATATGAAACTTGCTTAGGTGACCTGTACAGTGTTGCCTGGATGGAAGACAGTGACATTCACAATTTGCGAACGGAAACATTGCATCAACAGTATGAACTGGTTAAAAGAAGGACAATGAATGGAAATTCCGTCTACGGCTCTCACGTGATGCAATATGGGGATGTAGGGATTAGCAAGAATAATCTCGTACTGTATTTGGGAACTAACCCTGCTAATGATAATTTCACTTTCGTGGATGAAAACTCCTTGAGGCCACCTACAAAAGCAGTCAACCAACGTGATGCTGATCTCATCCATTTTTGGGATAAGTACCGCAAAGCTCCTGAGGGTTCTCCTAGGAAAGTTGAAGCTCAGAAACAAGTTGTGGAAGCTATGTCTCACAGAATGCATTTAGACAACAGCGTGAAACTTATTGGAAAGCTGTTATTTGGCATTGAGAAGGGTCCAGAAGTGCTCAACACTCCTCGATCTGCTGGGCAACCACTTGTTGATGACTGGAACTGCTTGAAAATGATGGTCAGGACATTTGAGACATATTGTGGATCCCTGTCCCAGTATGGGATGAAGCACATGAGGTCTTTTGCAAACATCTGTAACGCAGGAATACAGAATGAGCAAATGGCGGAGGCCTCGGCACAGGCATGCGTCAGTGTTCCCTCCACTCCCTGGAGTTCTCTGCACAAGGGTTTCAGTGCATAA 1485 0.4519 MNFFSSSLIVFLVASLSGAAFAGRDLDGGIIRLPSEVTTFFRRGRTEEGNRNAETEGTKWAVLIAGSSGYWNYRHQSDVCHAYQLLRKGGLKEENIIVLMYDDIAFNEENPRPGIIINSPDGGDVYKGVPKDYTGEDVTVNNFFAVILGNKSALTGGSGKVVDSGPNDHIFIYYTDHGGPGVLGMPTSPYLYANDLIEVLKKKHASGGYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNADESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKRRTMNGNSVYGSHVMQYGDVGISKNNLVLYLGTNPANDNFTFVDENSLRPPTKAVNQRDADLIHFWDKYRKAPEGSPRKVEAQKQVVEAMSHRMHLDNSVKLIGKLLFGIEKGPEVLNTPRSAGQPLVDDWNCLKMMVRTFETYCGSLSQYGMKHMRSFANICNAGIQNEQMAEASAQACVSVPSTPWSSLHKGFSA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0170 494 PRINTS Hemoglobinase (C13) cysteine protease signature 60 84 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 PRINTS Hemoglobinase (C13) cysteine protease signature 132 147 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 PRINTS Hemoglobinase (C13) cysteine protease signature 160 179 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 PRINTS Hemoglobinase (C13) cysteine protease signature 85 114 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 PRINTS Hemoglobinase (C13) cysteine protease signature 209 225 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 FunFam Vacuolar-processing enzyme beta-isozyme 57 353 - -
Prci8g0170 494 PANTHER HEMOGLOBINASE FAMILY MEMBER 52 479 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 PIRSF AE 2 494 IPR043577 GO:0004197|GO:0051603
Prci8g0170 494 PIRSF Legumain 2 494 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 Gene3D - 354 482 IPR046427 -
Prci8g0170 494 Gene3D - 57 353 - -
Prci8g0170 494 FunFam Vacuolar-processing enzyme beta-isozyme 354 482 - -
Prci8g0170 494 Pfam Peptidase C13 family 59 329 IPR001096 GO:0006508|GO:0008233
Prci8g0170 494 CDD legumain_C 356 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0170 Prci-Chr8 1015921 1020820 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0170 K01369 - tcc:18588032 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0170 8 1015921 1020820 Prci8g0170 8 1015921 1020820 ECH