Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0167 ATGGCCGAAGAAGCACAGTATTCATCGGGCACCGATACCACGACTCACAAGCGCAAGTACGAAGAGCCATCGCTCTCTCAATCAACTCACAGGCCAACTGGCTTCTCGGCGCCGATCGCGTCTACGTCTCCCGATGGTTCTCATGCTCCACCTCCCTCCTACAACAGCGTCCCGCCCCCGGCGGCAACTGGTATCGAGCTTGCCAAGCAGCGGGCTCAGGAGGTTGCTGCTCGCCTTTTGAACAGTAGTGGAGCAACTGGGTTGGATGCCAAACGTTCCAAGGTTGAGAACGGTGCTTCGGGATTTGATGCCAGCGATGCGAAGCCACAGTACTCAGTCCCATCAGCTGCTCCCATTTCTTATGCCTATCAGGGTACTAGCAAAAAGATAGACATTCCGAATGGAAGGGTCGGCGTTATTATTGGCAAAGGCGGGGAGACAATCAAGTATCTTCAAACGCAGTCTGGAGCAAAGATCCAAGTTACCCGTGATATGGATGCAGATCCAAATTCTCCAACAAGGATGGTGGAACTTATGGGCACTCCTGATCAAATTGCTACTGCTGAGAAATTGATCAACGAAGTTCTTGCTGAGGCTGAAGCTGGAGGTTCTGGTATTGTCGCTAGGCGACTGACTGGACAAGCTGGGTCTGAACAATTTGTGATGAAAATTCCAAATAATAAAGTTGGACTTGTAATTGGAAAAGGAGGAGAAACGATAAAGAATATGCAAGCTCAGACTGGAGCAAGAATTCAGGTGATACCATTGCATCTTCCCCCAGGTGACACATCAACGGAAAGAACATTACAAATTGATGGAACCAGTGAACAAATTGAGTCTGCGAAACAGTTGGTTAATCAAGTCATTAATGAGAACCGTCTTAGAAATCAATCAATGTCCGGTGGTTATCCTCAACAAGGTTACCAAGCCCGACCACCTACAAGCTGGGTTCCTCCTGGTGCTCCTATGCAACAACCTGGTTATGGCTATGTGCAGCCTGGAGCATACTCTGGTCCATCACCCCAGTACAATATGCCTCAACCACCATATCCAGGATATCCTAGCCAGTCATCTGGTGGATACTCCTCCAATTGGGACCAGTCCTCTGTGCCACCTCAACAGTCAACTCATGGTGGTGGTTACGATTACTATGGTCAGCAGCAACAGCAAAATGCTGGGGGTCCTCCACCTGCAGCTGATGGGACTGCTTATAATTATGGTCAGCCACCTTCCTCTGGTTATAACCATCCTGGCCAGGGTTATCCTCAGGACAGCTATGGTGGGTATAGTGCACCACCACAATCAGGATATGGACAACCACCTACATACGATCAACAGCAAGGCTATGGCTCAGCCTCCAACTATGGCAGTGGCAGCAACCCAACACAGGAGGGCCACACCCCCAGTTATGGGTCTCAAGGTGACTCAACCCAGCCTCCTCCAGCTGTCCCAACTTCAATGTCCCAGCAAGGTTATGGTTCAAACCAGCAGCCGAGCCCAAACCCAACTACCTATCCAGCTCAAGGAGCTGCACAGCCAGGTTATGGGATGCCTCCAACTTCACAAGCAGCTTATGGCAGTCAACCCCAAGCACAGTCTGGTTATGCAGCTGGTTATGGGCCCCCTCCCCCTCAAAAGCCTAGTGGCACTCCTGTATACGGGCAGTCCACACAATCACCTAGCACAGCAGGAGGCTATGGTCAATCTGGCCAATTGCAACCAGGGTATCCTCCGGCACAGCCCCCTTCTGGCTATGCTCAATCAGAATCTGGTCAACAAAGAGCCCCACCGCCATATGGTTCTGCAGTGCAACCAGGTTATGGGCCCCCACCATACGGTGCTCCTCCTGGCGGTCAGCCTGGTTATGGTCAGGCACCTCCATCGTACAACAGTGGTTCTTATGGTTCTGGTTACACTCAACCTCCAGTATATTCTGCTGATGCTACTCCGGCACAGGCTGCTCAGCAAAGTGGTGTCACCAAAGCATCGCCTCAAAGTTGA 2001 0.5117 MAEEAQYSSGTDTTTHKRKYEEPSLSQSTHRPTGFSAPIASTSPDGSHAPPPSYNSVPPPAATGIELAKQRAQEVAARLLNSSGATGLDAKRSKVENGASGFDASDAKPQYSVPSAAPISYAYQGTSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDADPNSPTRMVELMGTPDQIATAEKLINEVLAEAEAGGSGIVARRLTGQAGSEQFVMKIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQIDGTSEQIESAKQLVNQVINENRLRNQSMSGGYPQQGYQARPPTSWVPPGAPMQQPGYGYVQPGAYSGPSPQYNMPQPPYPGYPSQSSGGYSSNWDQSSVPPQQSTHGGGYDYYGQQQQQNAGGPPPAADGTAYNYGQPPSSGYNHPGQGYPQDSYGGYSAPPQSGYGQPPTYDQQQGYGSASNYGSGSNPTQEGHTPSYGSQGDSTQPPPAVPTSMSQQGYGSNQQPSPNPTTYPAQGAAQPGYGMPPTSQAAYGSQPQAQSGYAAGYGPPPPQKPSGTPVYGQSTQSPSTAGGYGQSGQLQPGYPPAQPPSGYAQSESGQQRAPPPYGSAVQPGYGPPPYGAPPGGQPGYGQAPPSYNSGSYGSGYTQPPVYSADATPAQAAQQSGVTKASPQS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0167 666 ProSiteProfiles Type-1 KH domain profile. 125 192 - -
Prci8g0167 666 ProSiteProfiles Type-1 KH domain profile. 217 285 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 26 50 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 297 312 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 602 622 - -
Prci8g0167 666 Pfam KH domain 129 194 IPR004088 GO:0003723
Prci8g0167 666 Pfam KH domain 221 286 IPR004088 GO:0003723
Prci8g0167 666 Coils Coil 271 291 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 1 66 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 428 508 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 297 666 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 583 597 - -
Prci8g0167 666 Gene3D K Homology domain, type 1 121 212 IPR036612 GO:0003723
Prci8g0167 666 Gene3D K Homology domain, type 1 213 312 IPR036612 GO:0003723
Prci8g0167 666 FunFam KH domain-containing protein 212 312 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 624 666 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 550 569 - -
Prci8g0167 666 MobiDBLite consensus disorder prediction 405 419 - -
Prci8g0167 666 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 215 294 IPR036612 GO:0003723
Prci8g0167 666 MobiDBLite consensus disorder prediction 354 395 - -
Prci8g0167 666 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 117 445 - -
Prci8g0167 666 SMART kh_6 216 290 IPR004087 GO:0003676
Prci8g0167 666 SMART kh_6 124 197 IPR004087 GO:0003676
Prci8g0167 666 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 123 202 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0167 Prci-Chr8 987726 993327 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0167 K13210 - qsa:O6P43_015921 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0167 8 987726 993327 Prci8g0167 8 987726 993327 ECH