Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0163 ATGGCCTCAGAAGCACAGTTTCACGGTCTAACAGCAGCAGAATTTGCAGTACTTGAGCCCATCATCAACAAATACCACAAATTCGAAGATCGTGCCAGCACATGCACTTCCATCATAACACAGAGAATCGAAGCTCCGGCTCGAACTGTGTGGGGTTTCATACGGAGCTTCGAGAGCCCTCAGAAGTACAAGCACTTCATTAAGAGCTGCAACATGAGAGGTGACGGAGGCGTGGGCAGCATCAGAGAGGTCACGGTGGTTTCGGGTCTCCCAGCATCCACCAGCACCGAGAGGCTCGAGATCCTAGACGATGACAACCACATACTCAGCTTCAGGGTAGTGGGTGGCCAGCACCGACTCAAAGATTATCGCTCCGTCACGTCGGCGAACGAGTTTCAGACGGAAGATGGCAAGGCGTACACTATGGTCGTGGAGTCATACATCGTGGACATACCTCCGGGAAATACTGCAGAGGATACGAAGATGTTCGTGGACACTGTGGTGAAGCTCAACCTTCAGAAACTCGCCCTCCTTGCTATCTCAACCCTCCACGCACACCGTTAG 564 0.5248 MASEAQFHGLTAAEFAVLEPIINKYHKFEDRASTCTSIITQRIEAPARTVWGFIRSFESPQKYKHFIKSCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDNHILSFRVVGGQHRLKDYRSVTSANEFQTEDGKAYTMVVESYIVDIPPGNTAEDTKMFVDTVVKLNLQKLALLAISTLHAHR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0163 187 Gene3D - 2 186 IPR023393 -
Prci8g0163 187 CDD PYR_PYL_RCAR_like 35 176 - -
Prci8g0163 187 PANTHER - 34 177 - -
Prci8g0163 187 SUPERFAMILY Bet v1-like 35 176 - -
Prci8g0163 187 Pfam Polyketide cyclase / dehydrase and lipid transport 40 176 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0163 Prci-Chr8 965872 966782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0163 K14496 - rcu:8275610 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1237 2 9192973 9194086 Prci8g0163 8 965872 966782 CCT
Prci8g0163 8 965872 966782 Prci8g0163 8 965872 966782 ECH