Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0109 ATGGCTGTGTTGTCCACCACCGCCACGGTGTCCATCCCCGGCAACAATGTTCATACTACTCAGGAAACCAAGTTTGGATCCTCAATTTTTGTCGGCTTCAGAGCCAAGCCCCGTAGATTTTGCATCAGATGCTCCGTTGCTAGTGATTCCTCGCCGGACGCCACTGCCACACAATCCGATTCGGAGACTGCCATTGAAGTTCCCGAAGAATCTTCCTCTCTGATTTCTGCTCTTAATGTCGAAAGGGCTCTCCGTGGCATACCGATTACAGATGTTGACCATTATGGTAGACTCGGCATTCCCAGAGGAAGTTCATACGAAAAGGTGGCAGTAGCATATGATAGCAAGGTTGAGGAGTTGAAGAATGAAGGGTTAGAGGAAGACGAACTGAACAAGAAACTGGAACATCTCAAAGAATCATATTCAGTTTTATCGTCTAAAGAAGAGAGAAGAATGTATGACTGGAGCTTGGCTAGGTCGGAGAATACAGATCAATACGTTTGGCCCTTCGAGGTTGACATAACGCAAACCCCTCAAGGCACTCCTCCTCTGCAGGAGCCAGAGGAAGACGGACCAACCAGAGTGGTAGGGTACTTCCTGTTGGGATGGGTATTAATATCATTTGTGCTATCGATCGCACTAAGTTAA 648 0.4738 MAVLSTTATVSIPGNNVHTTQETKFGSSIFVGFRAKPRRFCIRCSVASDSSPDATATQSDSETAIEVPEESSSLISALNVERALRGIPITDVDHYGRLGIPRGSSYEKVAVAYDSKVEELKNEGLEEDELNKKLEHLKESYSVLSSKEERRMYDWSLARSENTDQYVWPFEVDITQTPQGTPPLQEPEEDGPTRVVGYFLLGWVLISFVLSIALS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0109 215 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 75 166 - -
Prci8g0109 215 Gene3D DnaJ domain 92 159 IPR036869 -
Prci8g0109 215 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 214 IPR044199 GO:0009535|GO:0010598
Prci8g0109 215 ProSiteProfiles dnaJ domain profile. 93 157 IPR001623 -
Prci8g0109 215 Coils Coil 120 147 - -
Prci8g0109 215 SUPERFAMILY Chaperone J-domain 91 158 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0109 Prci-Chr8 708339 709790 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0109 K23052 - gmx:100793741 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0109 8 708339 709790 Prci8g0109 8 708339 709790 ECH