Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0100 ATGGGTATTCGTAGATCGTCATTGGCCATAATAATATTGACATGGCTTTCTGTGTTTGAAGGATGTTTAAATGTCGTCCATGGCGACTTTAATTATAAAGAAGCTCTCACCAAGTCCCTCATATTTCTAGAGGCTCAACGCTCAGGGAAACTCCCTCCCAATAACAGAGTCCCTTGGAGGGGAGACTCAGCACTTGACGACGGAAAACTCGCTAATGTGGACCTTTCTGGAGGATATTATGATGCAGGAGATAATGTCAAATATGGTCTGCCCTTGGCTTTCACAGTCACTACTCTTTCATGGGCTGCGGTATATTTCAAGGACGAGATTCAAGCTGCGAAGGAGATGGATAGTGTTCGTGACGCCATTAAGTGGGGCACCGATTATCTTCTCAAATGTGCTTCCCGACGCGATCGATTATACGTGCAGGTGGGGGACCCAGAAGAGGATCACCATTGTTGGGTTCGACCAGAAAAAATGAAGACAAAACGAACAGTTTTGCAGATTGGTGAAGGCACGCCCGGTTCCGAGATCGCAGCAGAAACTTCAGTAGCATTGGCTTCTTCTTCCGTTGTTTTCAGAAGTGTAGATCGTGCCTATGCTCGTCGTCTTCTCAACAAGGCCAAACTGCTTTTCAAAATGGCAAAAACCCACAAGGGAACTTATGATGGAGAATGTCCCTTCTACTGCTCTTTTTCTGGCTACAATGATGAGTTGTTGTGGGCAGCAACATGGCTATATATTGCAACCAAGAAGCCAATGTATTTGACGTATATTCAAGAGGAAGCCATAAGTGCTTATGTGAACGAGTTTAGTTGGGATCTTAAATATGCAGGAGCTCAAGTTCTTATCACCAAGTTACTTTTCGAAGGAGTACCGAAATTGGAGACATTCAAATATCAAGCCGATAGTTTCATATGCTCCGTCCATCCCGAGAGTCCCTACAGTCAGATTAAATTAACTCCGGGTGGCGTCGTTCACTTGAGGGATGGAGCCAACACGCAGTATGTGACCGGCACGGCAATGATATTCACCCTCTATGGCGATATTCTGGAAGAACACAAGCAAAAAATCACCTGTGGAACCAAACAATTCGCCGCGGCTGACCTCTTCAACTTCGCCAAAAGCCAGATGGATTACATTCTGGGGAAGAATCCGGAAGGAAGATCAATAATGGTGGGATTCGGGAACAACCCGCCAAAGCAAGCGCACCACAGAGGAGCGTCGGTGCCGATGACGTCGGCAAACGAGGAGGTAGACTGTCCGGCGAGCTTCATCAAATGGTTACAACACGACGGACCAAACCCTAACGAGCTCACCGGCGCCATCTTGGGAGGGCCCGACAAAAACGACCACTTCGACGACAAACGTACCGATTCTGCAGCCACCGAACCATGCACCTACGTCAACTCTCTTGCCGTCGGTCCTCTCGCGAAGCTCGCATCTATTTATAATAAATAA 1461 0.4723 MGIRRSSLAIIILTWLSVFEGCLNVVHGDFNYKEALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLSGGYYDAGDNVKYGLPLAFTVTTLSWAAVYFKDEIQAAKEMDSVRDAIKWGTDYLLKCASRRDRLYVQVGDPEEDHHCWVRPEKMKTKRTVLQIGEGTPGSEIAAETSVALASSSVVFRSVDRAYARRLLNKAKLLFKMAKTHKGTYDGECPFYCSFSGYNDELLWAATWLYIATKKPMYLTYIQEEAISAYVNEFSWDLKYAGAQVLITKLLFEGVPKLETFKYQADSFICSVHPESPYSQIKLTPGGVVHLRDGANTQYVTGTAMIFTLYGDILEEHKQKITCGTKQFAAADLFNFAKSQMDYILGKNPEGRSIMVGFGNNPPKQAHHRGASVPMTSANEEVDCPASFIKWLQHDGPNPNELTGAILGGPDKNDHFDDKRTDSAATEPCTYVNSLAVGPLAKLASIYNK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0100 486 PANTHER ENDO-1,4-BETA-GLUCANASE 12 481 - -
Prci8g0100 486 Gene3D - 26 486 IPR012341 GO:0005975
Prci8g0100 486 FunFam Endoglucanase 28 485 - -
Prci8g0100 486 SUPERFAMILY Six-hairpin glycosidases 29 485 IPR008928 GO:0005975
Prci8g0100 486 MobiDBLite consensus disorder prediction 438 458 - -
Prci8g0100 486 Pfam Glycosyl hydrolase family 9 32 475 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0100 Prci-Chr8 647750 650392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0100 10 482 Glycoside Hydrolase AT3G43860 68.908 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0100 K01179 - qsa:O6P43_019147 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0100 8 647750 650392 Prci8g0100 8 647750 650392 ECH