Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0057 ATGAAGATAGCAGTGGAGGGTTGCATGCATGGCGACCTGGACAATGTCTATAAAACCATTCAACATCTCGAAAAAATACACAACACCAAAATCGACCTCCTCATCTGCTGCGGCGATTTTCAGGCTGTCCGTAACGAAGAAGATTTGAAGAGCTTGAACGTGCCGCCGCGCTATCGCTCTATGAATTCATTCTGGAAGTACTATTCGGGGTTGGAGGTTGCCCCGTATCCGACAATATTCATTGGTGGAAACCACGAAGCATCTAATTACTTGTGGGAATTGTATTATGGAGGATGGGCTGCGCCTAATATATATTTCTTGGGAGTTGCTGGGGTGGTCAGGTTTGGGAATATCCGAATTGGTGGAGTGTCTGGGATTTACAATGCACGTGATTATAAATTAGGACATTTTGAGAGGCCTCCTTATGATCAAAGTACAATCAGGTCTGTGTATCATGTTCGTGAATACGATGTTCACAAGCTCATTCAAGTTGAGGAACCATTTGATATCTTTCTCTCGCATGACTGGCCTGTGGGAATCACTGATTGTGGGGATTGGAAGGATCTCATTCAGCGCAAACATTTTTTTAAGCAGGAGATAGAGGAAAGAAGACTTGGGAGTAAGGCTGCAGCTCAACTCCTGGAAAAATTGAAACCACGGTATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGAGATGGTGGCTCTCAGACAAAATTTCTTGCTCTAGATAAGTGCATTGCTGGTCGGGATTTCTTACAGATTGTGGAAATTGAATCAGAGGCAGGACCTTATGAAATTAAGTATGATGAGGAATGGTTAGCTATAACACGGCGGTTCAACCCTGTCTTCCCTTTAACTGCCAAAGCTGCAGATTTCAGAGGTATAGATCTTGAGATGGAGGACTGTCGTCAATGGGTTAGAAGCAGGCTGCAAGAGAGAGAGCACAAGCCTTTTGAATTTGTTAGAACTGCTCCATGTTACGATCCTTCTCAATCCAACGTCAGGGGTAGCTTTGCTGTGAATCCTCGAAATCCACAGACAGAATCTCTTTTGCAGCTCTTAGGACTTCCGTATCTTCTTGATAGCACTCCTGAACTACAGGGCTTACCACCTTATCCTTCTCCCTCAATTCAAAGAGGTTCCATTGGTTATGACAGCGAGGACATTCCGATTGATGATGGAGATGATGTTGGTGATGATGAATAA 1227 0.4401 MKIAVEGCMHGDLDNVYKTIQHLEKIHNTKIDLLICCGDFQAVRNEEDLKSLNVPPRYRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVRFGNIRIGGVSGIYNARDYKLGHFERPPYDQSTIRSVYHVREYDVHKLIQVEEPFDIFLSHDWPVGITDCGDWKDLIQRKHFFKQEIEERRLGSKAAAQLLEKLKPRYWFSAHLHCKFAALVQHGDGGSQTKFLALDKCIAGRDFLQIVEIESEAGPYEIKYDEEWLAITRRFNPVFPLTAKAADFRGIDLEMEDCRQWVRSRLQEREHKPFEFVRTAPCYDPSQSNVRGSFAVNPRNPQTESLLQLLGLPYLLDSTPELQGLPPYPSPSIQRGSIGYDSEDIPIDDGDDVGDDE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0057 408 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Prci8g0057 408 CDD MPP_Dbr1_N 3 259 IPR041816 -
Prci8g0057 408 Pfam Lariat debranching enzyme, C-terminal domain 242 364 IPR007708 GO:0006397|GO:0016788
Prci8g0057 408 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Prci8g0057 408 SUPERFAMILY Metallo-dependent phosphatases 1 235 IPR029052 -
Prci8g0057 408 MobiDBLite consensus disorder prediction 372 408 - -
Prci8g0057 408 Gene3D - 9 258 IPR029052 -
Prci8g0057 408 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 403 - -
Prci8g0057 408 FunFam Lariat debranching enzyme 9 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0057 Prci-Chr8 374221 379615 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0057 K18328 - gmx:100812726 692.189