Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0042 ATGATGTTTCGATTGGGAATGCTACCGCTTCTTCTGCTGGTGGTGGTTTCTGCTGAGACGCGCAGAATGGAAGCAGCAGCAGAATCATCGAACTCTGAGTCCGGGAATGAGTACACGCTGGATTCAATAAGGGAGGCTTTGGAGAGACAAGAGGATACCATCATTCTTAATCTCATCGAGAGGGCTAAGTTCCCTCTCAATTCACACACCTACGATCAACCTTACCTGACCATTCCCCATTTCCGTGGCTCGCTTCTCGACTTCCTCGTCAAGAACACCGAGCACATTCAAGCAAAGGCAGGTAGATTCAAAAGCCCCGAAGAGAACCCCTTCTTCCCAGAAAATTTATCACCGTCACTTGTGCCTGATTACCCCTTCTCTAAGATTTTGCACCCTGGAGCCTCTTCAGTCAACATAAACAAGTCCATCTGGAAAGTTTATTTTCATGAGGTGCTTCCACTGATTGTTGCTTCCGGTGATGATGGTAACTACGCACAAACTGCAGCTAGTGATCTTTCCTTATTGCAGGCCATCTCCAGAAGGATCCACTACGGAAAATTCGTAGCAGAGGTTAAATTCAAGGAATCCCCTCGGGACTACGAGCCTTTAATTCGAGCTCAGGACAGAGAAGGATTGATGAAACTGTTGACAGTGGAGAGCGTAGAAGAGATGGTGAGGAAGAGGGTTGAAAAGAAGGCAATGGTGTTTGGCCAAGAAGTGAGCCTTGAGCGTGACGACGACGGCGACGTGCCGAGTTACAAGGTCAAGCCTACCCTAGTTTCTCGCCTTTACGAGAAATGGATTATCCCTCTTACAAAGGATGTTGAGGTCGAGTACCTTGTACGCCGTCTTGATTGA 858 0.4779 MMFRLGMLPLLLLVVVSAETRRMEAAAESSNSESGNEYTLDSIREALERQEDTIILNLIERAKFPLNSHTYDQPYLTIPHFRGSLLDFLVKNTEHIQAKAGRFKSPEENPFFPENLSPSLVPDYPFSKILHPGASSVNINKSIWKVYFHEVLPLIVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFKESPRDYEPLIRAQDREGLMKLLTVESVEEMVRKRVEKKAMVFGQEVSLERDDDGDVPSYKVKPTLVSRLYEKWIIPLTKDVEVEYLVRRLD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0042 285 FunFam Chorismate mutase 31 285 - -
Prci8g0042 285 ProSiteProfiles Chorismate mutase domain profile. 31 285 IPR008238 GO:0004106|GO:0009073
Prci8g0042 285 PANTHER CHORISMATE MUTASE 25 285 IPR008238 GO:0004106|GO:0009073
Prci8g0042 285 SUPERFAMILY Chorismate mutase II 34 285 IPR036263 GO:0046417
Prci8g0042 285 NCBIfam chorismate mutase 39 285 IPR008238 GO:0004106|GO:0009073
Prci8g0042 285 PIRSF Chor_mut_AroQ_eu 26 285 IPR008238 GO:0004106|GO:0009073
Prci8g0042 285 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 32 285 IPR037039 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0042 Prci-Chr8 302430 304304 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0042 K01850 - gmx:100791341 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0042 8 302430 304304 Prci8g0042 8 302430 304304 ECH