Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2562 ATGGGAACGAGCAACCACTTGATTGGTCTGCTAAACTTCTTAACGTTCTTGCTGTCGATTCCTATACTGGGAGGAGGGATATGGCTGAGCAGCAGGGCAAACAACACGGACTGCCTCACGTTCCTCCAGTGGCCTCTCATCGTCATCGGAATCAGCATCATGGTCGTCTCCCTGGCGGGTTTCGCCGGCGCCTGCTACCGCAACACCGTCCTAATGCGGCTCTACCTGGTGGTGATGTTCTTGGTCATCGCAGCACTGATCGGATTCATCATCTTCGCCCATGCCGTGACAGATAAGGGTTCCGGTCGGGGGGTGATGGGCCGGGCTTATCTGGACTATTATCTGGAGGATTATTCGGGTTGGTTGGAGGAGCGGGTGGCAAGTGATAGCTACTGGGGAAAGATTAGCTCCTGCGTCAGGGACTCCAAGGTGTGCAGAAAGATGGTCAGAACTGTTGGTGGCATGCCTGAAACTGCTGATATGTTCTTCCTCAGAAGGCTCACTCCTCTCCAGTCAGGTTGCTGCAAGCCTCCGACAGTGTGTGGGTACGTGTACGAGAGAGAGACGGTGTGGAAAGCAGGGGCGGTGGCGGGAGCCAACCCAGACTGCAGCAGGTGGAGCAATGATCAGAGTCAGCTGTGCTACGAGTGTGACTCTTGCAAGGCCGGGGTTCTGGCCAGCCTCAAGACGAGCTGGAGGAAGGTCTCCGTCATCAACATTGTTGTCATGATCATTCTTGTAATCGCTTATATCATTGCTTATGCTGCTTTCAGAAACAACCGCAAGATCGACAACGACGAACCCTCCGGCGAAGCTCGAATGACCAAAGTCGAGCCTTCCAGGATTCATTTTTAG 855 0.5392 MGTSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCLTFLQWPLIVIGISIMVVSLAGFAGACYRNTVLMRLYLVVMFLVIAALIGFIIFAHAVTDKGSGRGVMGRAYLDYYLEDYSGWLEERVASDSYWGKISSCVRDSKVCRKMVRTVGGMPETADMFFLRRLTPLQSGCCKPPTVCGYVYERETVWKAGAVAGANPDCSRWSNDQSQLCYECDSCKAGVLASLKTSWRKVSVINIVVMIILVIAYIIAYAAFRNNRKIDNDEPSGEARMTKVEPSRIHF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2562 284 PANTHER TETRASPANIN-8-RELATED 1 262 IPR044991 GO:0009734|GO:0016020
Prci7g2562 284 PRINTS Transmembrane four family signature 6 29 - -
Prci7g2562 284 PRINTS Transmembrane four family signature 39 65 - -
Prci7g2562 284 PRINTS Transmembrane four family signature 66 94 - -
Prci7g2562 284 Pfam Tetraspanin family 6 252 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2562 Prci-Chr7 37968061 37970999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2562 1 277 Miscellaneous Gene Families AT5G60220 69.784 4.06e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2562 - - gmx:100788977 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2562 7 37968061 37970999 Prci6g0375 6 2312871 2317004 CCT
Prci7g2562 7 37968061 37970999 Prci7g2562 7 37968061 37970999 ECH