Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2402 ATGGAGTTAGACAGCATGCTCCACTTCCTTCAGGACAAGACCATTTTAGTGACCGGTGCCACTGGCTTTCTCGCCAAAATTTTTGTGGAGAAGGTACTGAGGGTTCAGCCAAATGTCAAGAAATTATACCTTCTTTTGAGAGCCTCGGATAACATATCTGCCACTCAACGCTTGAACAATGAGATCACAGGAACGGAGTTGTTCAAATTGTTGAAGGAAAATCATGGTGCAGAGTTCAATTCCTTTATCGCAAAGAAGTTGGCTCTGGTTCCTGGGGACATCTCTCACGAGGACTTGAATCTGAAGGACACCGTTCTGAGGGAAGAGATTTGCAGTCAAACTGATGTTATAGTAAACTTGGCTGCAACAACTAACTTTGATGAAAGATACGATGTTGCACTGGGTATAAATACCTTGGGAGCTAAGCATGTTTTGAGCTTCGCCAAAAAATGTACTAAACTGAAGTTGCTTGTCCACGTCTCAACAGCATATGTATCTGGGGAGAAAAGAGGACTGATAGCAGAGGATCCGTATAGAATGGGAGCATCACTGAATGGAGTGTTGGGACTAGACATTGACGCTGAGAAGAAGTTGGTAGAAGAAATTCTGAAACAGCTTCAAGAGGAGGGAGCCACAGAATGTGAAATTAAAGGTGCCATGAAAGACTGGGGTATTAAAAGGGCAAATACATATGGATGGCCAAACACATACGTGTTTACAAAGGCATTGGGAGAAATGATTATTGGAACAATGAAGGGAAACCTGCCTGTTGTCATCGTACGTCCCACCATCGTTACCAGCACCTACAAGGAACCTTTTCCTGGTTGGGTTGAAGGTGTAAGAACTATAGACAGCTTGATTGTTGCATATGGCAAAGGAAAATTAACTTGTTTTCCAGCAGACATCGAAGCAGTTTTTGACGCGATACCAGCTGACATGGTGGTGAATACTATGTTAGTGGCGATGGTGGCTCATGCGAACCAGGCAGATGATATAATATATCACGTGGGTTCCTCAGTGAGAAATCCCGTGAGATACTTCAATCTCAGAGACTACGGCGTGAGATACTTCACATCAAAGCCACTGAGGAACAAGGATGGGAAGATTGTCAAGGTTGGCAACGTCACTGTATTGAACAGCATGGATAGCTTCCGCACATACATGTTCATCCGCTACATGCTTCTCTTGAAGGGACTAGATCTGGCCAATAAAGCTTTTTGTCAGTACTTCCGGGGGATGTATCTTGACCTGAACAGGAAGATTCAGATTGTGATGCGGTTGGTTGATCTTTACAGGCCCTACCTGTTTTTCAATGGCTTATTTGATAATATGAACACAGAGAAGCTGCGGATTGCGGCGGCACGGGGTGGGGTAGAGATGGACGTGTTCTATTTTGACACGAAGATGATTGACTGGGAGGACTACTTCATGAATATACATATCCCTGGCATCATTAAGTACGTCCTCAAGTGA 1473 0.4406 MELDSMLHFLQDKTILVTGATGFLAKIFVEKVLRVQPNVKKLYLLLRASDNISATQRLNNEITGTELFKLLKENHGAEFNSFIAKKLALVPGDISHEDLNLKDTVLREEICSQTDVIVNLAATTNFDERYDVALGINTLGAKHVLSFAKKCTKLKLLVHVSTAYVSGEKRGLIAEDPYRMGASLNGVLGLDIDAEKKLVEEILKQLQEEGATECEIKGAMKDWGIKRANTYGWPNTYVFTKALGEMIIGTMKGNLPVVIVRPTIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFPADIEAVFDAIPADMVVNTMLVAMVAHANQADDIIYHVGSSVRNPVRYFNLRDYGVRYFTSKPLRNKDGKIVKVGNVTVLNSMDSFRTYMFIRYMLLLKGLDLANKAFCQYFRGMYLDLNRKIQIVMRLVDLYRPYLFFNGLFDNMNTEKLRIAAARGGVEMDVFYFDTKMIDWEDYFMNIHIPGIIKYVLK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2402 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 337 IPR036291 -
Prci7g2402 490 CDD FAR_C 390 489 IPR033640 -
Prci7g2402 490 Pfam Male sterility protein 392 490 IPR033640 -
Prci7g2402 490 CDD FAR-N_SDR_e 13 361 - -
Prci7g2402 490 Gene3D - 8 375 - -
Prci7g2402 490 Pfam Male sterility protein 17 318 IPR013120 -
Prci7g2402 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 490 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2402 Prci-Chr7 36744017 36747565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2402 113 489 Acyl Lipid Metabolism Gene Families AT4G33790 61.273 3.23e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2402 K13356 - gmx:100805240 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2402 7 36744017 36747565 Prci6g0575 6 3864500 3869979 CCT
Prci7g2402 7 36744017 36747565 Prci7g2402 7 36744017 36747565 ECH