Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2290 ATGGTTTGTCGCATCTATGGCGTCGCCGAGCTCCGCACCTTCCTTCTTCTTCTTCTTCTGGGTTTCCCCCTTGCATTGTCGAAAATGCCAAATCCCAGGTCGTCGGCCTCTTCTTCGGTCAGCTCTGGTCAGATAAACTCCAACTCAGTTCTGGTGGCTCTTCTGGACTCGCATTACACGGAAGTCGCTGAGCTTGTGGAGAAGGCAATGCTCTTGCAGACTCTGGAGGATACTGTCGGCAGCCACAATATCACCATCTTCGCTCCCAGAAATGAAGCTCTCGAACGCGATCTCGACCCGGAGTTCAAGCGCTTCCTTCTCGAACCCGGTAATCTCAAGTCCCTACAGACCTTACTCATGTTCCATATCATTCCTACCAGAATCGGATCGGAACAGCTGCTGAATCGGGCCGGGTTGACCCGTCACGGTACGCTTTCTAATGACTATCTGCATCTCGAGAACAATGGGACTATGGAATGGACAGTGGACCACGCCAAGATTATCCAACCTGACGCGGTGACCCGATCCGATGGCATCATCCACGGGATTGAGCGCCTCTTGGTGCCACGTTCCGTGCTAGATGACTTCAACCGACGGCGAAGCCTCCAGTCCATCGTGGCGGTGAAGCCAGAGGGAGCACCGGAAGTGGATCCGAGGACTCATCGGCTCAAGAAACCCGCCCCACCGGCTAAACCCGGTGCTCCTCCAGCTTTGCCAATCTACGATGCAATGGCTCCTGGACCAGCACTAGCTCCAGCTCCGGCGCCGGGGCCAGACGGAGCCCACCACCACTTCAACGGTGAAGCCCAGGTGAAGGGTTTTATTCAGACACTGCTACATTACGGCGGGTATAATGAAATGGCAGATATATTGGTGAATCTAACATCCTTAGCCACCGAAATGGGTCGACTAGTGTCCGAGGGGTATGTGCTCACTGTTTTGGCTCCCAATGATGAGGCCATGGCTAAATTGACTACCGACCAATTGAGTGAACCGGGCGCACCAGAACAGATTATCTATTACCATCTCATACCGGAGTATCAAACCGAAGAGAGTATGTACAATGCCGTCCGACGGTTCGGTAAGGTCCGGTATGATACCCTACGGTTACCGCATAAGGTGGTGGCTCAGGAGGCAGATGGATCAGTGAAATTCGGGCAGGGAGATGGGTCGGCGTATTTGTTCGACCCGGATATCTATACGGATGGGCGGATCTCGGTTCAGGGCATCGATAGCGTATTGTTCCCACTGGAAGAGGAGACGAAACCCATTAACAGAACGGTTCAACCGGCTAAGGTCGTCGTCAAGCACAGGAGAGGAAAATTGATGGAGGCAGCGTGCTGGATGCTTGGAACCATTGGACAACATGATAGATTCATCACTTGCCACTGA 1392 0.533 MVCRIYGVAELRTFLLLLLLGFPLALSKMPNPRSSASSSVSSGQINSNSVLVALLDSHYTEVAELVEKAMLLQTLEDTVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPTRIGSEQLLNRAGLTRHGTLSNDYLHLENNGTMEWTVDHAKIIQPDAVTRSDGIIHGIERLLVPRSVLDDFNRRRSLQSIVAVKPEGAPEVDPRTHRLKKPAPPAKPGAPPALPIYDAMAPGPALAPAPAPGPDGAHHHFNGEAQVKGFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDSVLFPLEEETKPINRTVQPAKVVVKHRRGKLMEAACWMLGTIGQHDRFITCH 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2290 463 FunFam Fasciclin-like arabinogalactan protein 16 266 417 - -
Prci7g2290 463 Gene3D FAS1 domain 50 190 IPR036378 -
Prci7g2290 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 5 455 IPR044654 -
Prci7g2290 463 SMART fasc_3 312 417 IPR000782 -
Prci7g2290 463 SMART fasc_3 85 190 IPR000782 -
Prci7g2290 463 ProSiteProfiles FAS1/BIgH3 domain profile. 46 187 IPR000782 -
Prci7g2290 463 SUPERFAMILY FAS1 domain 51 190 IPR036378 -
Prci7g2290 463 Gene3D FAS1 domain 290 416 IPR036378 -
Prci7g2290 463 SUPERFAMILY FAS1 domain 250 417 IPR036378 -
Prci7g2290 463 Pfam Fasciclin domain 296 416 IPR000782 -
Prci7g2290 463 Pfam Fasciclin domain 58 189 IPR000782 -
Prci7g2290 463 MobiDBLite consensus disorder prediction 211 236 - -
Prci7g2290 463 ProSiteProfiles FAS1/BIgH3 domain profile. 271 399 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2290 Prci-Chr7 36152159 36155259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2290 - - qsa:O6P43_000545 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2290 7 36152159 36155259 Prci6g0703 6 4629198 4633214 CCT