Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2026 ATGTGGAAAAATAGTGGCACTCCTGCTGATTCTTTCTACCAAATCCGCCCCGAGTGTGCCGACGATGTCCCGAAAACTCGATTTAAGATCAAGGCAGGTAGAACTCTAAGTTCAAGGAAATGGCATTCTGCATTTGATGCTGAAGGGCATCTGGATATAGGCAAGACTCTGAGTCGAATCTACCAAGGGGGAATCCATCCATCAATCAGGGGAGAAGTCTGGGAATTTTTACTTGGCTGCTATGATCCAAAAAGTACATTTGATGAAAGAGAGCAGATAAGACAGCGACGAAGGATACAATATGCTAAGTGCAAGGAAGATTGCCGCAAGTTGTTTCCACTTGTTGGAAGTGGTAAATTTATTACAGCACCTGTGATCACAGAAGATGGCCAGCCAATTCAAGATCCGTTGGTGTTGTTAGAAACAAATCCAGACAAGGGAGTGATTGTCCCTGTTCAAAATGGCATAAATGATTCAAGTACTGGCAGTGCAAATAAGTTAGAGAAGGTGATGGACAAGAGAGTAATCCAGTGGATGTTAACTCTTCATCAAACAGGTCTTGATGTGGTTCGCACTGATAGAACTCTGGTTTTTTATGAGAAGCAAGAGAACTTGTCAAAATTGTGGGATATTCTTGCTGTTTATGCATGGATAGACATGGATGTGGGTTATTGTCAAGGAATGAGTGACCTTTGCTCCCCCATGGTAATTCTTCTCAATGATGAAGCTGATGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACCAATAACTCCGTTGGGGTGGAGGCTCAACTAAGTAATTTGGCGTCAGTTACTCAAGTCATTGATCCAAAACTTCATCAACATATAGAGGCTCTTGGTGGAGGTGACTATCTATTTGCTTTTCGGATGCTTATGGTTTTGTTTCGTCGTGAATTCTCCTTTTGTGACTCTTTGTACCTTTGGGAGATGATGTGGGCTCTGGAATATGATCCTGACTTGTTCTTGATTTATGAAGAGCCTGAATCAGTTTCTAAAAAATCTGAGAGATCTACTGAAGGGAGAACAAAGTCATTACGTCAATGTGGGAAGTTTGAGAGAGAAAATATGAAAAACTCTGCAAAGACTGCTGATGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAAGAGCTCAAAACTAATGCAGGAAGCACGTGGCCTGGATGATGTTGTCAAGATATTGAATGACATGACCGGAAAATTAGATGCCAAAAAAGCTTGCACTGGGGCAATGAAACTTCACAGAAAATACTTGAAAAAGGCTAACGCCAATAAGTCATAG 1341 0.4176 MWKNSGTPADSFYQIRPECADDVPKTRFKIKAGRTLSSRKWHSAFDAEGHLDIGKTLSRIYQGGIHPSIRGEVWEFLLGCYDPKSTFDEREQIRQRRRIQYAKCKEDCRKLFPLVGSGKFITAPVITEDGQPIQDPLVLLETNPDKGVIVPVQNGINDSSTGSANKLEKVMDKRVIQWMLTLHQTGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDMDVGYCQGMSDLCSPMVILLNDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASVTQVIDPKLHQHIEALGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLIYEEPESVSKKSERSTEGRTKSLRQCGKFERENMKNSAKTADAPLPISVFLVASVLKDKSSKLMQEARGLDDVVKILNDMTGKLDAKKACTGAMKLHRKYLKKANANKS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2026 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 268 437 IPR035969 -
Prci7g2026 446 ProSiteProfiles TBC/rab GAP domain profile. 64 330 IPR000195 -
Prci7g2026 446 FunFam TBC1 domain family member 15-like 162 260 - -
Prci7g2026 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 49 290 IPR035969 -
Prci7g2026 446 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 415 - -
Prci7g2026 446 SMART tbc_4 61 353 IPR000195 -
Prci7g2026 446 Gene3D - 266 445 - -
Prci7g2026 446 Pfam Rab-GTPase-TBC domain 173 328 IPR000195 -
Prci7g2026 446 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 159 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2026 Prci-Chr7 34450398 34456659 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2026 - - csav:115697426 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2026 7 34450398 34456659 Prci7g2026 7 34450398 34456659 ECH