Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2003 ATGCAGCTGCAAATATCTCCAAGCTTAAGGCATGTCACTGTGCTTCCAGGGAAAGGGTTGAAAGAGTTCATCAAAGTGAACGTTGTGTCACGGCGAGTTTCTTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACATTACTTGTTCGGTCTGTGTTTGTGTTGACAGCAGTGGACTCCATTGATGGTGAAAACAGGTGCTCAACCATAGGTTGCCTGGGAAGGAAACTAGGACCAAGAATTATCGGAAGAAAACTAGAACCAACTGTCCCAGAAGTGATATTCCAGGTATTAGATGAGCCTCTAGGCAAAGATGATCTACAAGGAAGATCTGATATTCCACAGACGTTAGAAGAGTTCATGGCTGAAGTAAGGGAAGGTGAATATGACGTCAAGACATTTGCTGTCAAACTGCGAGAGATGGTCACCCTCATGGAACAAAGGACCAGGACAGCTAAAATTCAAGAATACTTGTATCGTCATGTAGCATCAAGCAGCATTCCCAAGCAGCTTCACTGCCTTGCCTTAAGGCTAGCAAATGAGCACACCAACAATGCAGAAGCTCGCCTTCAGCTTCCTTCTGCAGAGCTCGTGCCTGCCCTGGTTGACAACAGCTACTTCCACTTTGTCCTTGCCTCAGACAATGTTCTGGCTGCCTCTGTGGTTGCAACTTCCCTTGTCCGCAACTCCTTGAAGCCCCATCTGGTTGTTCTTCACATCATTACAGATAAAAAGACTTACTATCCCATGCAGGCTTGGTTTTCTTTGCACCCTTTATCACCTGCTATTATTGAGGTCAAGGCATTGCATCATTTTGACTGGTTTTCAAAGGGGAAAGTGCCTGTTCTGGAAGCAATGGAGAAAGATGAGAAAGTGAGGTCACAGTTTAGAGGGGGATCATCAGCTATTGTTACCAATACTAGTGAGAAGCCATATGTTATTGCATCAAAGCTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATACGCATACATCTGCCGGAGCTATTCCCAAGTCTAAACAAGGTGGTCTTCCTGGATGATGACATTGTGGTACAAACTGATCTTTCCCCTCTTTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACTTGTAATGGAGAAGATAAGTTTGTAATGTCGAAGAGGCTCAAAAACTATTTGAACTTCTCCCACCCTCTAATATCCAAGAGTTTCGATCCCAGTGAATGTGCTTGGGCTTATGGAATGAACATCTTTGATCTAGAGGCTTGGAGGAAGACCAACATAAGCCTTAAATACCATTATTGGGTTGAGCAGAATATAAAATCAGACCTAAGTTTGTGGCAGCTAGGGACCTTACCTCCTGGGTTAATAGCCTTCCACGGTCATGTCCACATTATTGATCCTTTCTGGCACATGCTGGGATTGGGATATCAGGAGAACACAAGCCTTGCTGATGCAAAGAGTGCTGGTGTCATCCATTTTAATGGGCGGGCAAAGCCTTGGCTGGAGATAGCTTTTCCTCAGCTCAGGCCAATGTGGGCCAAGTATATCGACTTTTCAGATAAGTTCATCAAGAATTGTCGCATTAGGGCATCATAG 1602 0.4438 MQLQISPSLRHVTVLPGKGLKEFIKVNVVSRRVSYRMLFYSLLFFTLLVRSVFVLTAVDSIDGENRCSTIGCLGRKLGPRIIGRKLEPTVPEVIFQVLDEPLGKDDLQGRSDIPQTLEEFMAEVREGEYDVKTFAVKLREMVTLMEQRTRTAKIQEYLYRHVASSSIPKQLHCLALRLANEHTNNAEARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSLKPHLVVLHIITDKKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFSKGKVPVLEAMEKDEKVRSQFRGGSSAIVTNTSEKPYVIASKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKNYLNFSHPLISKSFDPSECAWAYGMNIFDLEAWRKTNISLKYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTSLADAKSAGVIHFNGRAKPWLEIAFPQLRPMWAKYIDFSDKFIKNCRIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2003 533 CDD GT8_like_1 207 519 - -
Prci7g2003 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 110 530 IPR029993 GO:0047262
Prci7g2003 533 Pfam Glycosyl transferase family 8 175 506 IPR002495 GO:0016757
Prci7g2003 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Prci7g2003 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 528 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2003 Prci-Chr7 34311696 34315493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2003 1 533 Glycosyltransferase AT5G54690 77.196 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2003 K20867 - qsa:O6P43_028959 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2003 7 34311696 34315493 Prci6g1036 6 7220802 7225315 CCT
Prci7g2003 7 34311696 34315493 Prci7g2003 7 34311696 34315493 ECH