Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1915 ATGGATCGATTGCTAAAAGCTGCAAGAACATCTGGCTCCCTCAACCTCTCAAATCGCTCGCTCAGGGAAGTTCCAAAGGAGGTGTACCGGAATCTGGAGGGTGCTAGTGGGGATGATAAGTGGTGGGAGGCCGTGGATCTCCAAAAGCTCATTTTGGCTCATAATGATATTGACTCATTAAAGGAAGATCTTAGAAACTTACCTTCACTAACTGTGTTGAACGTTAGCCACAACAGACTTTCTGAGCTTCCAGCTGCAATAGGAGAGCTATCTCAGCTAAAGTTGTTAGATGTTTCATTCAATTTGATAAATAAAATACCAGAGGAATTTGGATCAGCAGCATCACTTGTTAAGCTTGATTTCTCTAACAATCAACTGAAGGAGCTTCCAAACTCACTTGGCCAATGCATAGGATTGTCAGAATTGAAGGGATCAAACAACCTCATTGCCAGTTTACCAGATGAATTAGCAAATTGTTCAAAATTGACAAAGCTAGACATGGAGGGAAACAAACTAACAGTGATACCTGAAAACCTCATTTCTTCATGGACCATGCTTACTGAATTGAATGCATCAAAAAACTTGCTGAACTGCATACCAGTCAGCATTGGAGGTCTTTCTCGTCTAATTCGCCTTGACCTCCATCAAAACAGAATCTCATCAATCCCTTCATCAATCATGGGTTGCCATTCACTTGCCGAGTTTTATTTGAGGAATAACAACCTTTCTGCTGTACCAGCGGAGATTGGGACACTCTCACGACTAAGGACTTTAGATCTTCACTCTAACCAGTTGAAGGAGTATCCAGTGGAGGCATGCAAGTTGGGTCTTTTAGTCTTAGATCTTTCGAACAATTCATTGAGTGGCTTACCCCCTGAATTGGGCAAGATGACTACCCTGAGGAAGCTTTTGCTTATGGGCAATCCTTTGCGGACTCTTCGAAGCTCATTAGTCTCTGGACCAACTCCAGCACTGCTGAAATTCCTTCGAAGTAGACTTTCTGAGGGTGAAGACTCTGAATCTACAATCAGAACAAAAGAGGATGTAATTGCAAAGGCTGCTAGATTGTCTATCACTTCAAAGGAACTTTCTTTGGAGGGGATAGGATTGAGTGCCGTTCCATCAGAAATATGGGAATCAGGGGAGATCGTAAAAGTTGATCTTTCAAGAAATTCCATTGAGGAGTTGCCAGTGGAGCTCTCTTCTTGTGTTTCCCTCCAGGCACTGATTTTATCTAAGAATAGAATTAAAGATTGGCCTGGTTCAATTCTTGAATCACTTTCAAGTCTACATTGTTTGAAGCTGGACAACAATCCCCTGAGACAGATTCCTCCAGGTGGTTTCAAAACTGTGCCTATGCTTCAGATTCTTGATCTAAGTGGTAATGCAGCTTCACTGCCAAATGGCCCTGCATTCTCTAATATGCCGCATCTGCAGGAGCTTTACCTGAGAAGAATGCAACTAAGTGAAGTCCCCTCAGATGTTTTGATGCTGTCTCAACTTCGAATCCTTGACTTGAGTCAAAATTCCCTTCAATCTATCCCATCGGGGTTCAAAAATCTCACTTCTCTCACGGAGCTTGACCTATCTAATAATAACATCTCCGTCCTTCCCCCTGAACTGGGTTTGCTGGAATCAAGCCTTCTGGCACTGAGACTTGATGGAAATCCTCTCAGAAGCATTCGAAGGACTATCTTGGATAAAGGAACTAAAGCCGTTCTGAAATATTTGAAGGACAAATTGCCAGAGCAATAA 1755 0.4256 MDRLLKAARTSGSLNLSNRSLREVPKEVYRNLEGASGDDKWWEAVDLQKLILAHNDIDSLKEDLRNLPSLTVLNVSHNRLSELPAAIGELSQLKLLDVSFNLINKIPEEFGSAASLVKLDFSNNQLKELPNSLGQCIGLSELKGSNNLIASLPDELANCSKLTKLDMEGNKLTVIPENLISSWTMLTELNASKNLLNCIPVSIGGLSRLIRLDLHQNRISSIPSSIMGCHSLAEFYLRNNNLSAVPAEIGTLSRLRTLDLHSNQLKEYPVEACKLGLLVLDLSNNSLSGLPPELGKMTTLRKLLLMGNPLRTLRSSLVSGPTPALLKFLRSRLSEGEDSESTIRTKEDVIAKAARLSITSKELSLEGIGLSAVPSEIWESGEIVKVDLSRNSIEELPVELSSCVSLQALILSKNRIKDWPGSILESLSSLHCLKLDNNPLRQIPPGGFKTVPMLQILDLSGNAASLPNGPAFSNMPHLQELYLRRMQLSEVPSDVLMLSQLRILDLSQNSLQSIPSGFKNLTSLTELDLSNNNISVLPPELGLLESSLLALRLDGNPLRSIRRTILDKGTKAVLKYLKDKLPEQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 405 426 IPR001611 GO:0005515
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 115 136 IPR001611 GO:0005515
Prci7g1915 584 SMART LRR_bac_2 90 109 - -
Prci7g1915 584 SMART LRR_bac_2 186 202 - -
Prci7g1915 584 SMART LRR_bac_2 252 271 - -
Prci7g1915 584 SMART LRR_bac_2 159 178 - -
Prci7g1915 584 SMART LRR_bac_2 113 132 - -
Prci7g1915 584 SMART LRR_bac_2 229 248 - -
Prci7g1915 584 SMART LRR_bac_2 521 541 - -
Prci7g1915 584 SMART LRR_bac_2 206 225 - -
Prci7g1915 584 SMART LRR_bac_2 498 517 - -
Prci7g1915 584 SMART LRR_bac_2 67 86 - -
Prci7g1915 584 PRINTS Leucine-rich repeat signature 498 511 - -
Prci7g1915 584 PRINTS Leucine-rich repeat signature 277 290 - -
Prci7g1915 584 SUPERFAMILY L domain-like 39 317 - -
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Prci7g1915 584 Pfam BspA type Leucine rich repeat region (6 copies) 110 195 IPR026906 -
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 69 90 IPR001611 GO:0005515
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 500 521 IPR001611 GO:0005515
Prci7g1915 584 SUPERFAMILY L domain-like 361 559 - -
Prci7g1915 584 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Prci7g1915 584 SMART LRR_sd22_2 206 231 - -
Prci7g1915 584 SMART LRR_sd22_2 159 181 - -
Prci7g1915 584 SMART LRR_sd22_2 90 112 - -
Prci7g1915 584 SMART LRR_sd22_2 498 520 - -
Prci7g1915 584 SMART LRR_sd22_2 521 536 - -
Prci7g1915 584 SMART LRR_sd22_2 252 272 - -
Prci7g1915 584 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Prci7g1915 584 Gene3D Ribonuclease Inhibitor 3 128 IPR032675 -
Prci7g1915 584 Gene3D Ribonuclease Inhibitor 467 580 IPR032675 -
Prci7g1915 584 Gene3D Ribonuclease Inhibitor 226 331 IPR032675 -
Prci7g1915 584 SMART LRR_typ_2 297 320 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 381 403 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 521 544 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 206 229 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 498 520 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 159 182 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 114 136 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 404 426 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 252 275 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 475 497 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 427 450 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 90 113 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 276 296 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 546 568 IPR003591 -
Prci7g1915 584 SMART LRR_typ_2 67 88 IPR003591 -
Prci7g1915 584 Gene3D Ribonuclease Inhibitor 336 466 IPR032675 -
Prci7g1915 584 Gene3D Ribonuclease Inhibitor 129 225 IPR032675 -
Prci7g1915 584 PANTHER - 145 312 - -
Prci7g1915 584 Pfam Leucine rich repeat 253 310 IPR001611 GO:0005515
Prci7g1915 584 Pfam Leucine rich repeat 202 242 IPR001611 GO:0005515
Prci7g1915 584 Pfam Leucine rich repeat 47 103 IPR001611 GO:0005515
Prci7g1915 584 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1915 Prci-Chr7 33595161 33604140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1915 49 541 Receptor kinase-like Gene Family AT4G08850 30.162 3.87e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1915 - - pcin:129315740 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1915 7 33595161 33604140 Prci7g1915 7 33595161 33604140 ECH