Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1910 ATGAGCAAAGCTGGGGACGAAGAAGAGGAAGAAGAGCGCTTTTACGAGTCTAACGACCGGCTAGTTTCGTCCTCTTGCTCCTGCTCCGCTTCCAACTCAGATGACGACAACGACAATGGCTCCAGTCCCAACTCTCCCAATTATGGTTCGGACCTACCCTTCCCCGTACCCAAATTCCCCGCGGCCTTGTGCAAGTACGATGTTTGGATCTCCGAACCGTCATCGGTTTCCGAACGCCGGACCCGTCTTCTTCGCGAGATGGGTCTCGCCGGCGACCCGTCATTGTCCCAGGGAAAGGCTGCCTCTGCCGATAATCTTAGAGGAATGGCCAATGGAGAGTTTGGCCGATCGGCTTCTACCGATCACGTGAGTCGCCAACAACAGGATGAAACTTCTGGTTGCACTGCCGGCATATCCCGATCGAAATCAGGCGGTGGCACGGATCTTGGTGACTTGCAATTGTGTACTGGTCAGTTTCGTCGTCATCGCAATAAATCTACTTCTTCCTTTTGTTCTTCAATCCTTTCTTTTCACTCGGTCGCTTCAGAGAACGGCTCATTTGTAAATAGCCGGAATCAAATCGTTAAGTCGACGTGCGGCAATGGCAATGAATCCCCGATTGCTAGTGCCGCCTTCCCCAATAAGCCGCCTTCAGGGAAAAATTGCAGAAGGGTAGATGAAATCCGAAGTGGCTCCTCGAACTTGAGGGTGGATTTTGGTCAGTTTTCGGTGGAGCCAGTTCTGGAGAACGCAGGTCGTGGCGAGGGGGAGGAAGGTGCGGACTGTAATGGACTTGACAGGGCTGATGAACAAGTGTGCACCATAAGAAATCTCGATAATGGGAAAGAGTTTGTAGTCAAGGAGATTAGGGAGGATGGGACGTGGAATAAATTAAAGGAAGTCGGAACTGAAAGGCAGTTGACCATGGAGGAGTTTGAGATGACAGTGGGCCACTCGCCAATTGTTCAAGAATTGATGAGACGACAACATTTCGAGGAGGGTAACAAGGACAATGTAGATTTAAATGCAACTGTAACTGCAAATGGTGGCAGTGGAGGTGGTACCAAGGTAAAGAAGAAAGGGAGTTGGTTTAAGAGTATAAAGAGTGTTGCTTGCGCCATGACGGGTTATAAGGACAGACGGAGCAGTGATGAAAGGGATACTTCGTCAGAAAAGGGTGGGCGGAGGTCAAGTTCTGCTACAGATGAAAGCCAAGATGCTTATTTACATAGGCTTGGAAGAGTACGGGTTAGGCAGTATGGCAAGTCATGTAAAGAGGTCACTGCACTCTATAAGAGCCAGGAGATACATGCTCATAATGGATCTATATGGAGCATTAAGTTTAGTTTGGACGGACAGTATCTTGCTAGTGCAGGTGAGGATTGTGTAATTCATGTGTGGCAAGTTGTGGAGTCAGAAAGGAAGGCGGAGCTGCTGGTGGAGAAACCAGGCTATGGGAATATGAATACGTTATTTGTTATGAATGGATCCACTGAACCAACCTTGCTATCCCCAAGCCATCCAGAGATGAAGAGACGGGGGAGGTCATCCATCAACAGAAAATCACTGAGCTTGGACCAGTTAGGGGTGCCAGAAACTATGTTTGCACTGACAGAAAAACCTATTTGCACATTCCAAGGTCATCTTGATGATGTGCTTGATCTATCTTGGTCCAAATCTCAGCATTTGCTTTCCTCTTCAATGGACAAAACGGTACGGCTGTGGCATGTATCTAGCAACTCTTGTCTGAAAGTTTTTACACACACTGACTATGTGACTTGCATCCAGTTTAATCCCGTTGATGATAGATACTTCATTAGCGGATCTTTGGATTCCAAGGTTCGCATATGGAGTATTCCTGATCGTCAAGTTGTTGATTGGACTGATTTGCATGAGATGGTCACTGCTGCTTGCTACACACCTGATGGGCAGGGTGCACTGGTAGGTTCATGCAAGGGTAGCTGCCATTTGTATAATACATCTGAAAATAAATTGCAAAAAAAAAGTGAGATTTTTCTGCAGAACAAGAAAAAGAAGTCAAATCTCAAGAAAATTACTGGCTTCCAGTTTGCTCCAGGAAGTTCATCAGTACTCATTACATCTGCTGATTCTCAAATTCGATTGGTTGATGGTGTCGATCTGGTTCATAAGTTCAAAGGATTTCGCAACACAAATAGCCAAATTTTAGCCTCGTTCACAGAGAATGGAAAATATATAGTCTCAGCAAGTGAGGATTCCCATGTGTACATATGGAAAAATGAAGCTAATTGCAGGCCCAACAGAACCAAAGGTGTCACTATCACTCAGTCCTATGAACATTTTCATTGTACAGATGTGTCAGTGGCTATTCCTTGGCCTGGTATGGGCGATGCATGGGAAATGCAAGGTACTTTATCTGGAGAACAAACCAGAGCTGATAGTATCCCCATCGGCGTCTCATCGGTGAATCATCCCCCAACCCCGGTAGATGAAAGCTTTGGTAATGAGGCATCAGGTTCCAACAATGATGCACTTCATGGAACTATAGCCAGTGCTACAAACAGTTATTTTTTTGACAGAATTTCCGCAACATGGCCAGAAGAAAAACTTGTTCTTGCTGCCAGGAGACGAAGCCCTCGAGTTAGCGTGGACATCTCAGACGGGGTTAATCAAAACATGTCAGCCTGGGGTCTGGTGATGGTAACTGCTGACCTTCGAGGGGAAATTCGAGCTTTTCAGAATTTTGGATTGCCACTGCGGATATAG 2745 0.4638 MSKAGDEEEEEERFYESNDRLVSSSCSCSASNSDDDNDNGSSPNSPNYGSDLPFPVPKFPAALCKYDVWISEPSSVSERRTRLLREMGLAGDPSLSQGKAASADNLRGMANGEFGRSASTDHVSRQQQDETSGCTAGISRSKSGGGTDLGDLQLCTGQFRRHRNKSTSSFCSSILSFHSVASENGSFVNSRNQIVKSTCGNGNESPIASAAFPNKPPSGKNCRRVDEIRSGSSNLRVDFGQFSVEPVLENAGRGEGEEGADCNGLDRADEQVCTIRNLDNGKEFVVKEIREDGTWNKLKEVGTERQLTMEEFEMTVGHSPIVQELMRRQHFEEGNKDNVDLNATVTANGGSGGGTKVKKKGSWFKSIKSVACAMTGYKDRRSSDERDTSSEKGGRRSSSATDESQDAYLHRLGRVRVRQYGKSCKEVTALYKSQEIHAHNGSIWSIKFSLDGQYLASAGEDCVIHVWQVVESERKAELLVEKPGYGNMNTLFVMNGSTEPTLLSPSHPEMKRRGRSSINRKSLSLDQLGVPETMFALTEKPICTFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHVSSNSCLKVFTHTDYVTCIQFNPVDDRYFISGSLDSKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGSCKGSCHLYNTSENKLQKKSEIFLQNKKKKSNLKKITGFQFAPGSSSEXLITSADSQIRLVDGVDLVHKFKGFRNTNSQILASFTENGKYIVSASEDSHVYIWKNEANCRPNRTKGVTITQSYEHFHCTDVSVAIPWPGMGDAWEMQGTLSGEQTRADSIPIGVSSVNHPPTPVDESFGNEASGSNNDALHGTIASATNSYFFDRISATWPEEKLVLAARRRSPRVSVDISDGVNQNMSAWGLVMVTADLRGEIRAFQNFGLPLRI 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1910 915 MobiDBLite consensus disorder prediction 810 839 - -
Prci7g1910 915 MobiDBLite consensus disorder prediction 19 49 - -
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 545 579 - -
Prci7g1910 915 SUPERFAMILY WD40 repeat-like 431 755 IPR036322 GO:0005515
Prci7g1910 915 PRINTS G protein beta WD-40 repeat signature 605 619 IPR020472 -
Prci7g1910 915 PRINTS G protein beta WD-40 repeat signature 455 469 IPR020472 -
Prci7g1910 915 PRINTS G protein beta WD-40 repeat signature 563 577 IPR020472 -
Prci7g1910 915 PANTHER WD REPEAT DOMAIN 44 6 912 IPR040324 -
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats profile. 585 619 IPR001680 GO:0005515
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats profile. 545 585 IPR001680 GO:0005515
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats profile. 436 477 IPR001680 GO:0005515
Prci7g1910 915 MobiDBLite consensus disorder prediction 1 53 - -
Prci7g1910 915 FunFam WD repeat-containing protein 44 526 792 - -
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 585 619 - -
Prci7g1910 915 Gene3D - 421 780 IPR015943 GO:0005515
Prci7g1910 915 MobiDBLite consensus disorder prediction 378 405 - -
Prci7g1910 915 Pfam WD domain, G-beta repeat 540 575 IPR001680 GO:0005515
Prci7g1910 915 Pfam WD domain, G-beta repeat 732 753 IPR001680 GO:0005515
Prci7g1910 915 Pfam WD domain, G-beta repeat 435 467 IPR001680 GO:0005515
Prci7g1910 915 Pfam WD domain, G-beta repeat 581 618 IPR001680 GO:0005515
Prci7g1910 915 MobiDBLite consensus disorder prediction 88 147 - -
Prci7g1910 915 SMART WD40_4 621 659 IPR001680 GO:0005515
Prci7g1910 915 SMART WD40_4 675 711 IPR001680 GO:0005515
Prci7g1910 915 SMART WD40_4 712 753 IPR001680 GO:0005515
Prci7g1910 915 SMART WD40_4 538 576 IPR001680 GO:0005515
Prci7g1910 915 SMART WD40_4 429 468 IPR001680 GO:0005515
Prci7g1910 915 SMART WD40_4 579 618 IPR001680 GO:0005515
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 436 469 - -
Prci7g1910 915 MobiDBLite consensus disorder prediction 117 142 - -
Prci7g1910 915 ProSiteProfiles Trp-Asp (WD) repeats profile. 732 753 IPR001680 GO:0005515
Prci7g1910 915 MobiDBLite consensus disorder prediction 378 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1910 Prci-Chr7 33580595 33586627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1910 543 777 Acyl Lipid Metabolism Gene Families AT3G18860 25.000 9.92e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1910 K20241 - qsa:O6P43_000927 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1910 7 33580595 33586627 Prci7g1910 7 33580595 33586627 ECH