Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1879 ATGGCTGCCATTAGCTTGGGAACGCACCGGTCTTTGAGCAGAGCAACTCAGGCTTTTGCACTCTCTACGTTTCCTCGTTGCAACGCTAAACTCTCTCTTTGGAGGACCATTTCTTCTGAGCCCCTCGCTGCTTCTTGTCCTTCAGCTTCAGGTGTGACCCAGATTGTACAAGCTTTGAAGGGAGAGGAAGGTGATGTGCTACTCAGGGGAGTGAAAGAGAAAAGCACAATAAAAGAAGTGAAGCATATTCTTGAGATGGCTCAACGGGCATTGTCAAGACAAGAAGTTCTTCATACAAATTTTCTTACCCCTCCAGTGCTGAAGGAATCTATGGAAGTGATGGGAAAACTAGCAGGTGTGAAAGCAATTGCTCAAGGAGGTTACCCACAGGCTGAACGCTGCCGGATTTCTGTTGGACATCCAGAAGAATTGACAAGTGACCCAGATATAATTGCAGCATTGAGCATTACTGGTAACTTTCAGTTTGAACCTTGTTCTCATGGTGACTTCCTTGGTTCAATCCTTAGTACAGGAATCACCAGGGAGAAACTTGGAGATATAATATTGCAGGGCGAACAGGGTGCTCAGATACTTATTGTTCCGGAACTAGCTGATTATGATTCGTCACTGGGTAAGGTTGGTAATGTTCCTGTATCTTGCAGCCAGATACCATTAATTTCTCTTGATTATGAACCACCAAGAACCAAGTCATTTAAAACCATAGAAGCATCGTTAAGAGTTGATGCACTAGCAAGTGCTGGGTTCAAAATTTCACGTTCAAAGCTAGTTGACTTGATCGGCGAGGGGGCTGTTCGTGTTAACTGGGTCCCTGTCACTACCAAAGGAGCCGCGCTCAAGAGTGGAGATATTGTATCTGTCAGTGGAAGGGGAAGATTAAAGATTGGTGAAATAAACTCAACAAAGAAAGGAAAGTTTGCAGTGGAGCTGATTCGGTATTTGTAA 963 0.4444 MAAISLGTHRSLSRATQAFALSTFPRCNAKLSLWRTISSEPLAASCPSASGVTQIVQALKGEEGDVLLRGVKEKSTIKEVKHILEMAQRALSRQEVLHTNFLTPPVLKESMEVMGKLAGVKAIAQGGYPQAERCRISVGHPEELTSDPDIIAALSITGNFQFEPCSHGDFLGSILSTGITREKLGDIILQGEQGAQILIVPELADYVXSSLGKVGNVPVSCSQIPLISLDYEPPRTKSFKTIEASLRVDALASAGFKISRSKLVDLIGEGAVRVNWVPVTTKGAALKSGDIVSVSGRGRLKIGEINSTKKGKFAVELIRYL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1879 321 Gene3D - 240 297 IPR036986 GO:0003723
Prci7g1879 321 Gene3D - 72 139 - -
Prci7g1879 321 SMART s4_6 246 303 IPR002942 GO:0003723
Prci7g1879 321 ProSiteProfiles S4 RNA-binding domain profile. 246 306 - -
Prci7g1879 321 Gene3D - 147 229 IPR012677 -
Prci7g1879 321 PANTHER UNCHARACTERIZED 135 320 - -
Prci7g1879 321 NCBIfam photosystem II S4 domain protein 75 319 IPR017506 -
Prci7g1879 321 SUPERFAMILY Alpha-L RNA-binding motif 105 309 - -
Prci7g1879 321 CDD S4 247 301 - -
Prci7g1879 321 Pfam Putative RNA-binding domain in YlmH 152 226 IPR040591 -
Prci7g1879 321 Pfam S4 domain 250 292 IPR002942 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1879 - - gmx:100793767 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1879 7 33439813 33444966 Prci7g1879 7 33439813 33444966 ECH