Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1830 ATGAGAAACATTTCAAAACCAGTATGGTCCACCTTCATTCTTCTTCTAGTAGCTGTTCTTGAGGTTGAAGGCCGTTATCTGCGGAACAGTGCTTCTTCTGCATTGTTAACTTCAGATGGAGTTGACGAAGATGGCATTCAACCCCAGAAGAATTCTCAGTTGTTTCTCAGAGGGATTACTGGAAAGACCGAACATTCTGATGAAAAGTGTGAGCAAATGTACGGCTTCTTGCCATGTTCAACTACCATGTTTGGTCATCTCTTTCTAATTCTGGTTTACGAGTTCTTGTTGTTCCATGGAGAATCATACTTGGCTTCTGGGGGTGAGCAGATCTTCAAGATTCTTGGCCCTGGGCTTCTCGGTGCGAGTGCCTTCGATCTTCTTGGTGCCCTTCCTGAATCCTTAATTCTTCTTGTTACTGGGCTTTCCAGAGAGACCAAGGATAGTGCACAAGAGTATGCTTCCACTGGAGTTGGCATATTGGCCGGATCATCCATCTTGCTCCTCACAATAGTTTGGGGAACCTGTGTCATCACTGGCAGGCAAAAATTTAAAATTGACTCAAGGCCTACGTACTCTCATAATTCAAATTCATCAAGTTCAACTCTCAAAGAATTATTAGCTGGGTTTGGGATTACTATGGATAAAGAGACAAAGGACATGGCAAGAATCATGGTTCTCTCAGTTATACCACTCGTAATTATGCAAATTCCTAGTGTGTTTGGACTCTCTTTAGTGCTTCGCTCGGTGGCCTTGATGGTTGCTCTTATCGTTACTGTCATTTTTGTCTTGTTGTACCTCATTTATCAGATATTTAAACCTCAGATAGAGAAAACAAGGCTAGAATACATAAAACATCATGATTTAATATTGAGAATTTTCCAGCACGTTGAAAAGCAAACCCTTCAAAAGATCCTCACTGAGGATGGAACTCCTAATGTGGCAGCCATTAATGGGCTATATAACGAAATTAGTCAACACGGTGGTGGAGACAGGGATTTATTGGCTTCTGAAGTGAGAGAGCTGCTGCTCAAGAACAAATTAACTGAGACAAATATCTCAGAGGAACAAGTTGAGGACATGTTAAGAGTGTTTGATCGAAATGGTGACCAAATTATAACCAAGGAAGAGTTTGTCACTGGGTTAACACAATGGATTGAGCAAACGAAGCATGCTCTGGATAAACAATACATACCAAGAAAATCAGTCCAGAACATTTATCAGGGTTTCCTCAAGCCATGGATGGAACACACCAGAAAAGAGCGCGAGATTAAGGGACATCTTGTATCTGAAATCTTAAGGCATGCTCAAAGCGATATGGTTGGCCGGCTTCTCAATGATGATGGCACGGCAGATGAGTCTGCTATAAGAAGGTTGTTTGAGGAAGTTGATATCAATAGAGATAATTGTGTTACTCAATCCGAGTTAAGGAACCTAGTGACCAACATCCACTTTGGTAAGGCAGTGGATGAGGAGGAAGCTGTCAAGAAAATAATTCAAGATTTTGATATCAACAGTGACAATGTGATTACTGAGGAAGAATTTGTGGATGGATTCACAAAATGGGTGCTTTCATTTTCCAGACAAGCTCCACGCTCAAAATCTCTGCCTCATGAAGAAGAAACTCATCAAACCTGGGAATATGTAGAGAAGGTTGTGGAAGAGAAGCATCAGCACAAAGGAATATATGGATGGATCATGGCTATACTAAATGTGGTTCTTGGAATTACTATTTTATCCATTCTTGCAGAGCCATTAATAACAAGTGTCCAGAAGTTCTCTGCAGAAGCAGGAATCCCATCTTTCTTTGCCTCATTCATTTTAGTCCCTCTGGCCACAAATTTTAGAGAAGCAACCTCGTCCATCAAAGAAGCTAGCCACAAGAAGAGAAGTAACACTTCTCAGACAATCTATGAGATTTATGGAGCAGTATTTATGAACAACATCCTTGGATTCTTGGCAATTGCGATTCTGATATATGTGAGAGAAATTATGTGGGAATTCTCAGCAGAAGTGTTGGTTGTTGCAATTGTCTGTGCCATAACGGGCCTTTCTGCAAGTTTCCGGCCCAATTTTCCTCTGTGGACATCCTTCGGCGCTTACCTTTTATATTTGCTGTCTTTAGTTCTGGTTTATGTTCTCAGTGATGTTCTGCATTACGCTTAG 2166 0.4114 MRNISKPVWSTFILLLVAVLEVEGRYLRNSASSALLTSDGVDEDGIQPQKNSQLFLRGITGKTEHSDEKCEQMYGFLPCSTTMFGHLFLILVYEFLLFHGESYLASGGEQIFKILGPGLLGASAFDLLGALPESLILLVTGLSRETKDSAQEYASTGVGILAGSSILLLTIVWGTCVITGRQKFKIDSRPTYSHNSNSSSSTLKELLAGFGITMDKETKDMARIMVLSVIPLVIMQIPSVFGLSLVLRSVALMVALIVTVIFVLLYLIYQIFKPQIEKTRLEYIKHHDLILRIFQHVEKQTLQKILTEDGTPNVAAINGLYNEISQHGGGDRDLLASEVRELLLKNKLTETNISEEQVEDMLRVFDRNGDQIITKEEFVTGLTQWIEQTKHALDKQYIPRKSVQNIYQGFLKPWMEHTRKEREIKGHLVSEILRHAQSDMVGRLLNDDGTADESAIRRLFEEVDINRDNCVTQSELRNLVTNIHFGKAVDEEEAVKKIIQDFDINSDNVITEEEFVDGFTKWVLSFSRQAPRSKSLPHEEETHQTWEYVEKVVEEKHQHKGIYGWIMAILNVVLGITILSILAEPLITSVQKFSAEAGIPSFFASFILVPLATNFREATSSIKEASHKKRSNTSQTIYEIYGAVFMNNILGFLAIAILIYVREIMWEFSAEVLVVAIVCAITGLSASFRPNFPLWTSFGAYLLYLLSLVLVYVLSDVLHYA 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1830 721 SMART efh_1 494 522 IPR002048 GO:0005509
Prci7g1830 721 SMART efh_1 455 483 IPR002048 GO:0005509
Prci7g1830 721 SMART efh_1 357 385 IPR002048 GO:0005509
Prci7g1830 721 Pfam EF-hand domain pair 349 382 IPR002048 GO:0005509
Prci7g1830 721 ProSitePatterns EF-hand calcium-binding domain. 366 378 IPR018247 -
Prci7g1830 721 ProSiteProfiles EF-hand calcium-binding domain profile. 490 525 IPR002048 GO:0005509
Prci7g1830 721 CDD EFh 456 520 IPR002048 GO:0005509
Prci7g1830 721 Gene3D - 311 396 - -
Prci7g1830 721 Pfam EF-hand domain pair 454 517 IPR002048 GO:0005509
Prci7g1830 721 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Prci7g1830 721 Gene3D - 397 533 - -
Prci7g1830 721 Pfam Sodium/calcium exchanger protein 572 712 IPR004837 GO:0016020|GO:0055085
Prci7g1830 721 SUPERFAMILY EF-hand 350 525 IPR011992 -
Prci7g1830 721 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 69 713 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci7g1830 721 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
Prci7g1830 721 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Prci7g1830 721 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1830 Prci-Chr7 33133172 33138359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1830 406 714 EF-hand Containing Proteins AT1G53210 40.785 1.63e-62 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1830 - - gmx:100799062 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1830 7 33133172 33138359 Prci7g1830 7 33133172 33138359 ECH