Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1829 ATGAGAACCATTTTGAGAAAATTATGCTTTGTTTTGTTCATTCTTTTTGCAATAAGGATTGTGGTTGAAGGGCGTCGTCTGAACTCCATAACTATTGATAATGAATTGGTTTCAGACGGGGTTGATGATGACGATGAAGTTCAACACAACAAAACTTACTTACTTTCCAAAGGCATTGAATCTGAACCCATTTATCAGGAGTGCAAGCAGATGTATGGGTTCTTGCCATGTTCAAACAACATTTTTGGCCACCTGTTTCTGATTCTGGTTTATGAGTACTTGTTGTTCCATGGAGAATCATATCTGGCTGATGGAGGTCAGCAGATCTTCAAGATTCTCGGTCCTGGGATTTTTGGTGCAAGTGCCTTTCACATCCTTAGTGCCCTCCCAGAATCCTTAATTCTTCTTGTTTCTGGACTTCTCAGCAGCAAGGAGATTGCTCAAGAGTATGCTTTTACTGGAGTTGGCTTGTTGGCTGGATCATCCATCTTGCTCTTGACAGTAGTATGGGGAACCTGTGTTATTATTGGGGCCCAACAATTCAACAGAGATTTAAATCTTAGAAACTTTGATGATTCTAATTCAGCATCTACAAGACTTGAAACATTTTTGACTGGTCATGGCATTACAACAGACTTGGAGACCAGCTACACTGCAAGAATCATGATTTTCTCCGTCATACCACTCATAATAATGCAAATCCCTAGTCTGTTTCAATTCTCTTCTGGGCCAAGATCTGTGACCTTGATAATTGCTCTCATCATTACTGCCATCTTTCTGTTATTGTACTTCACTTACCAGATTTTTGAACCCTGGATACAGAAAAGAAGATTGGAGTATGTGAAGCGCAATCATTTACTAGTACAAATATTACGACATGTTGAGAAGAGTACCCTGGAGAGGATTCTCACCAAGCATGGATCTCCAAATGTAAGCGCCATAAGAAGGCTATTTAGAGAAATGGATCAAGATGGAGACAGTGTTGTAACACCTTCTGAAGTAAAACAAATCCTGCTTAAGAGCAAATCAAATGAAAGAAGTATCAATGAAATGGAGATAGAAGACATGATGAGAGTTTTTGACTTGAATGCTGATGACAATAGAATTACTAAGGATGAATTTGTGAGCGGCTTTATAAAATGGCTTGAACAAACCAAGTTTGCTCTGAATAAACAGTATATGTCAAGGAAATCACTCAAGGAGTTATATCAGGTTTTCGAGCCTTGGATTGAGAACAAAAGGAGAGAACAAGAAACGAAGAGATATGTTATATCTGAAATCTTATGGCATATCCAGAACGATTTGGTTATCAACCTTCTCACTGAAGATGGCAAGCCCGATGAACTTGCTATAAGAGGGTTATTCGACAAGATCGATAGCAATAAAGATAACTGCATTTCCGGGTCTGAGTTAAGAAAACTACTCACAGATATCAATGTTGCTAAATCATCAATAGATGTGGAGGAAGCAGCCAGTAAATTCATTGAAGAACTTGACTCTGACAGTGACCATGTCATTAGTGAGGAGGAATTCATTTCTGGGTTAAAAAAATGGCTCAGCTCATCATCTCCCAGCCCCGCTCTTCTCTCAGACTCTGAGTCTCAAGAAGATATGGTGAAAATGTGGGAAGAGACAAACATGGTGGTGGAAGAGAACCAAAGCAAAGCAGTGGTTGATAAATCGGTATGGGCATGGCTAAAGGCAATAATGTATGTAGTGGTGGGGATTGCTATTTTATCTGGTCTGGCAGAGCCCTTGGTAGAAAGTGTACGCAAGTTCTCGGACAGTGCAGGAATTAATGCGTTCTTCATCTCATTTATATTAGTCCCATTGGCTACAAATGCTAAAATAGCAATTTCTGCAATCAAAGAAGCAAGCCATCAGAAGTCTAGGACTACCTCTCTTTCCATTTCTGAGATATATGGAGGGGTGTTCATGAACAATGTGCTAGGGTTCTTTGCAATTTCTGTTTTGATATATGCTCGAGGAATTACATGGGAATTCTCAGCTGAAGCTTTGGTTGTGGCACTGGTTTGTCTTGTGGCAGGCCTTGCGGCTAGTTTTAACTCAAGTTTTCCTATATGGTCTTCCTTCTGCGCCTATCTATTGTACCCATTTTCTCTCGTCCTTGTTTTTATCCTCAGAGATGTTCTCACCTATATTTAA 2166 0.398 MRTILRKLCFVLFILFAIRIVVEGRRLNSITIDNELVSDGVDDDDEVQHNKTYLLSKGIESEPIYQECKQMYGFLPCSNNIFGHLFLILVYEYLLFHGESYLADGGQQIFKILGPGIFGASAFHILSALPESLILLVSGLLSSKEIAQEYAFTGVGLLAGSSILLLTVVWGTCVIIGAQQFNRDLNLRNFDDSNSASTRLETFLTGHGITTDLETSYTARIMIFSVIPLIIMQIPSLFQFSSGPRSVTLIIALIITAIFLLLYFTYQIFEPWIQKRRLEYVKRNHLLVQILRHVEKSTLERILTKHGSPNVSAIRRLFREMDQDGDSVVTPSEVKQILLKSKSNERSINEMEIEDMMRVFDLNADDNRITKDEFVSGFIKWLEQTKFALNKQYMSRKSLKELYQVFEPWIENKRREQETKRYVISEILWHIQNDLVINLLTEDGKPDELAIRGLFDKIDSNKDNCISGSELRKLLTDINVAKSSIDVEEAASKFIEELDSDSDHVISEEEFISGLKKWLSSSSPSPALLSDSESQEDMVKMWEETNMVVEENQSKAVVDKSVWAWLKAIMYVVVGIAILSGLAEPLVESVRKFSDSAGINAFFISFILVPLATNAKIAISAIKEASHQKSRTTSLSISEIYGGVFMNNVLGFFAISVLIYARGITWEFSAEALVVALVCLVAGLAASFNSSFPIWSSFCAYLLYPFSLVLVFILRDVLTYI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1829 721 CDD EFh 451 516 IPR002048 GO:0005509
Prci7g1829 721 Gene3D - 285 377 - -
Prci7g1829 721 ProSiteProfiles EF-hand calcium-binding domain profile. 446 481 IPR002048 GO:0005509
Prci7g1829 721 ProSiteProfiles EF-hand calcium-binding domain profile. 309 344 IPR002048 GO:0005509
Prci7g1829 721 ProSiteProfiles EF-hand calcium-binding domain profile. 486 521 IPR002048 GO:0005509
Prci7g1829 721 Pfam EF-hand domain pair 313 376 IPR002048 GO:0005509
Prci7g1829 721 Pfam EF-hand domain pair 451 513 IPR002048 GO:0005509
Prci7g1829 721 Pfam Sodium/calcium exchanger protein 569 711 IPR004837 GO:0016020|GO:0055085
Prci7g1829 721 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 69 712 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci7g1829 721 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Prci7g1829 721 Gene3D - 378 518 - -
Prci7g1829 721 CDD EFh 314 378 IPR002048 GO:0005509
Prci7g1829 721 ProSiteProfiles EF-hand calcium-binding domain profile. 348 384 IPR002048 GO:0005509
Prci7g1829 721 SUPERFAMILY EF-hand 311 524 IPR011992 -
Prci7g1829 721 ProSitePatterns EF-hand calcium-binding domain. 459 471 IPR018247 -
Prci7g1829 721 SMART efh_1 352 381 IPR002048 GO:0005509
Prci7g1829 721 SMART efh_1 490 518 IPR002048 GO:0005509
Prci7g1829 721 SMART efh_1 313 341 IPR002048 GO:0005509
Prci7g1829 721 SMART efh_1 450 478 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1829 Prci-Chr7 33127844 33132978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1829 402 714 EF-hand Containing Proteins AT1G53210 40.741 1.61e-68 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1829 - - aprc:113855499 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1829 7 33127844 33132978 Prci7g1829 7 33127844 33132978 ECH