Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1828 ATGCTTCTTCCTGCCCGTTTCACCCTCTTCCTTGTAATCCTACTCATCTGCGGTCACACTCATGGCCGCCTTGTCATCCGCCTTCCATCATCGTCTTCCTCCTCTGATTCGATCTCAGATGGAGTCTCTGATGATCCGCAGCAGAGCAAGCACGTACTGCTGCTGCCCCTGGCGGTCCAGTCTCTGACGGATTCCACCTGCGAGCAGACGTATGGGTTCTTACCCTGCACCACTACTGTTCTTGGGAACTTGTTCCTCATCATCATCTATGGCTTCCTCATGTACAAGGCGGCTACTTACTTGTCCGGTGGGAGTGAGCTCTTGCTTGAGATCTTAGGCCCTGGTATAGTTGGCGGCTTGTTCCTTCCCATGCTCGGTGCTCTTCCTGATGCCATGCTTATCCTCGTATCCGGGCTTTCTGGGAGTAAAGAAACTGCTCAGAGTCAGGTCTTTGTTGGAATGGGCTTGCTAGCTGGGTCAACAGTTCTTCTTTTGACTATTATATGGGGTACCTGCGTAATTGTTGGGAAGTGCGACCTTGTCGATTCAAAAGCAATAGACTCACAAGACACGAGGGGGTTTAGCTTAACCGGTTCTGGTGTTAGTACAGATATTTGGACCAGTTATGCAGCAATGATTATGGCCATATCCATCCTTCCATTTCTGATTGTTCAGTTACCACAAATTCTTAATTCAACTTCAGGAAGGCACCTGGCTGTTTTGATTGCACTCATTGTCTCTCTGTCTTTGTTGATTGCTTATTGCCTTTACCAGATTTTCCAGCCTTGGATACAGAAGAGAAAACTCAATTATGTGAAACACAAGCACGTTATTTTAGGCCTTTTGAGACGCTTAAAGCAGCATGCATTGGGAAGGTTACTAAGAGATGACGGTGAACTTAATGAAGATATTATAAGAAAGTTATTTGATAGAATTGATGAGAACAATGATAGGCACCTTTCTTATGGTGAACTGAAAGCGCTAATTATTGGAATTGAATTTGAGGAGATTGACCTAGATCACGATGATGCTGTAAAAAGGATAATGGAAGATTTTGATACTTCTCAGGATTCACTTCTCGATGCAAATGAATTTGTAAATGGTGTACGTAAATGGCTTCGAAAGTCTATGCGTTCTCAGGATGCTTCTGGGGATGCTGGTCCACGGACAATAAAGTTCTTAAACGATTTTCACCAAGAAACAGAAAGGGAACGTGATCTATTGCATGTAGGGAATCATAGTGATACAGTTGAAGAGGGTGTAGCTGATGCTAAATGGAATGTTATCAAAGCAGTGCTGCTGCTGCTTCTTGGGACTGTGATAGCAGCTGTATTTGCTGATCCTTTGGTTGATGCAGTTGATAACTTTTCTGATGCCACAAGTATTCCTGCTTTCTTCATTTCCTTCATTGCACTGCCTTTGGCTACAAATTCTAGTGAAGCAGTGTCGGCAATCATTTTTGCTAGTCGTGATAAGAGGGAAACAGCCTCCTTAACCTTTTCTGAGCTATATGGGGCAGTGACAATGAACAATGTGCTGTGCCTTTCGGTGTTCTTGGCTCTTGTTTATGCGAGGGGATTGACATGGGACTTCACTTCAGAAGTGCTGGTTATTGTCATAGTTTGCGTTGTCATGGGTCTCTTTGCCAGCTTCCGCACAAGCTTCCCTCTCTGGACAGCAATAGTGGCTATCCTACTCTATCCCTTTTCCCTGGCTCTGGTCTATGTTCTTGATTATGTGTTTGGCTGGTCATAG 1755 0.4456 MLLPARFTLFLVILLICGHTHGRLVIRLPSSSSSSDSISDGVSDDPQQSKHVLLLPLAVQSLTDSTCEQTYGFLPCTTTVLGNLFLIIIYGFLMYKAATYLSGGSELLLEILGPGIVGGLFLPMLGALPDAMLILVSGLSGSKETAQSQVFVGMGLLAGSTVLLLTIIWGTCVIVGKCDLVDSKAIDSQDTRGFSLTGSGVSTDIWTSYAAMIMAISILPFLIVQLPQILNSTSGRHLAVLIALIVSLSLLIAYCLYQIFQPWIQKRKLNYVKHKHVILGLLRRLKQHALGRLLRDDGELNEDIIRKLFDRIDENNDRHLSYGELKALIIGIEFEEIDLDHDDAVKRIMEDFDTSQDSLLDANEFVNGVRKWLRKSMRSQDASGDAGPRTIKFLNDFHQETERERDLLHVGNHSDTVEEGVADAKWNVIKAVLLLLLGTVIAAVFADPLVDAVDNFSDATSIPAFFISFIALPLATNSSEAVSAIIFASRDKRETASLTFSELYGAVTMNNVLCLSVFLALVYARGLTWDFTSEVLVIVIVCVVMGLFASFRTSFPLWTAIVAILLYPFSLALVYVLDYVFGWS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1828 584 Gene3D - 250 384 - -
Prci7g1828 584 ProSiteProfiles EF-hand calcium-binding domain profile. 300 335 IPR002048 GO:0005509
Prci7g1828 584 Pfam EF-hand domain pair 305 368 IPR002048 GO:0005509
Prci7g1828 584 ProSiteProfiles EF-hand calcium-binding domain profile. 340 375 IPR002048 GO:0005509
Prci7g1828 584 SMART efh_1 344 372 IPR002048 GO:0005509
Prci7g1828 584 SMART efh_1 304 332 IPR002048 GO:0005509
Prci7g1828 584 SUPERFAMILY EF-hand 303 385 IPR011992 -
Prci7g1828 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 64 576 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci7g1828 584 CDD EFh 305 370 IPR002048 GO:0005509
Prci7g1828 584 Pfam Sodium/calcium exchanger protein 85 261 IPR004837 GO:0016020|GO:0055085
Prci7g1828 584 Pfam Sodium/calcium exchanger protein 431 575 IPR004837 GO:0016020|GO:0055085
Prci7g1828 584 FunFam Sodium/calcium exchanger NCL2 420 577 - -
Prci7g1828 584 ProSitePatterns EF-hand calcium-binding domain. 313 325 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1828 Prci-Chr7 33119776 33124358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1828 21 584 EF-hand Containing Proteins AT1G53210 67.549 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1828 - - qsa:O6P43_001016 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1828 7 33119776 33124358 Prci7g1828 7 33119776 33124358 ECH