Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1775 ATGGGAGGTGGGTTTAGAGTGCTTCACCTAGTTAGACCGTTTCTCTCTTTCCTGCCTGAAGTGCAGACTGCTGACAGGAAAATTCCATTTAGGGAGAAGGTCATATATACTGTAATTTCGCTGTTCATTTTCCTGGTTTGTAGCCAGCTCCCTCTCTATGGAATACACTCAACGACAGGTGCAGATCCATTCTATTGGATGCGTGTTATACTTGCTTCAAACCGTGGAACTGTTATGGAGCTTGGGATCACCCCTATCGTGACTTCTGGGCTGGTGATGCAACTGCTTGCTGGTTCAAAGATCATTGAAGTGGACAACAATGTCCGTGAAGATCGTGCTCTCTTAAATGGAGCACAGAAGCTGCTTGGCATCTTGATAGCTGTTGGAGAGGCAGTTGCCTATGTTCTTTCTGGGATGTATGGAAGTGTAGGCCAACTTGGAGTAGGGAATGCGATACTCATCATCATTCAGCTATGCTTTGCTGGTATCATTGTGATATGCTTAGATGAGCTTCTTCAAAAGGGATATGGCCTGGGTTCTGGAATTTCCCTATTCATTGCAACTAACATCTGTGAAAATATCATATGGAAGGCATTTAGTCCCACTACCATTAACAGTGGACGGGGTGCTGAATTTGAGGGTGCTGTTATTGCTCTATTCCATTTGTTGATAACCAGAACCGACAAAGTTCGTGCTCTACGTGAGGCATTTTATAGGCAGAATCTTCCCAATGTGACAAATCTTCTTGCCACTGTCTTGATCTTCTTAATTGTGATATACTTCCAAGGTTTCCGTGTGGTTTTGCCTGTAAGATCAAAGAATGCCCGTGGACAGCAGGGTTCTTATCCTATTAAACTATTTTATACCTCTAACATGCCCATTATCCTTCAGTCTGCTCTGGTCTCCAATCTGTACTTTATCTCTCAGCTGCTTCACCGAAAGTACAGTGGGAACTTCTTTGTGAATTTATTGGGCAAATGGAAGGAGACTGAATATGGAGGTGGTCAGTCTATCCCTGTTGGTGGTCTTGCATATTACATCACAGCACCTTCTAGCTTAGCTGATATGGCAGCCAATCCTTTCCATGCTTTGTTCTATTTGGTGTTCATGTTGTCCGCCTGTGCCTTGTTCTCTAAGACTTGGATTGAAGTCTCTGGATCATCTGCTAAAGATGTTGCCAAGCAATTGAAGGAACAACAAATGGTGATGCCAGGGCATCGTGAGTCGAACTTGCAGAAGGAGCTGAACCGATATATTCCCACTGCGGCGGCATTTGGGGGGATGTGCATCGGTGCACTGACCGTGTTGGCAGATTTCATGGGGGCAATTGGTTCAGGCACAGGGATATTACTTGCAGTGACCATTATCTATCAGTACTTCGAGACATTCGAGAAGGAGAGAGCTAGTGAGCTTGGCTTCCTTGGTTTCTAA 1431 0.4472 MGGGFRVLHLVRPFLSFLPEVQTADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVNLLGKWKETEYGGGQSIPVGGLAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFLGF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1775 476 SUPERFAMILY Preprotein translocase SecY subunit 10 466 IPR023201 -
Prci7g1775 476 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
Prci7g1775 476 PIRSF SecY_Sec61alpha 8 472 IPR002208 GO:0015031|GO:0016020
Prci7g1775 476 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 18 470 IPR002208 GO:0015031|GO:0016020
Prci7g1775 476 Pfam Plug domain of Sec61p 42 76 IPR019561 -
Prci7g1775 476 Pfam SecY 77 459 IPR002208 GO:0015031|GO:0016020
Prci7g1775 476 NCBIfam preprotein translocase subunit SecY 31 467 IPR002208 GO:0015031|GO:0016020
Prci7g1775 476 FunFam Transport Sec61 subunit alpha isoform 2 9 474 - -
Prci7g1775 476 Gene3D SecY subunit domain 9 475 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1775 Prci-Chr7 32858115 32862357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1775 1 476 Miscellaneous Gene Families AT1G29310 93.277 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1775 K10956 - gmx:100798372 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1775 7 32858115 32862357 Prci7g1775 7 32858115 32862357 ECH