Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1703 ATGGCCACACATACCCCAAAGAATATCCTCATCACTGGCGCAGCTGGATTTATTGCATCTCATGTTGCTAACCGGCTCATCCGGAACTACCCTGACTACAAAATTGTCGTTCTTGACAAACTTGATTACTGTTCTAATTTGAAGAACCTCATTCCTTCAAAATCATCTGCCAACTTCAAGTTTGTGAAGGGGGATATTGCAAGCGCTGACCTTGTCAACTACCTTCTTATCACTGAGTCCATAGACACGATAATGCACTTTGCTGCTCAGACCCATGTTGACAACTCTTTTGGTAACAGCTTTGAGTTCACCAAGAACAACATATACGGTACTCATGTTCTGTTAGAAGCCTGTAAGGTCACTGGCCAGATCAAACGGTTCATTCATGTGAGCACAGATGAGGTCTATGGGGAAACAGATGAGGATGCTGTTGTTGGAAACCATGAGGCTTCTCAACTTCTTCCCACAAATCCATACTCTGCCACAAAAGCTGGTGCAGAAATGCTGGTCATGGCATATGGCAGGTCATACGGGTTGCCTGTGATCACAACTCGTGGAAATAACGTTTATGGGCCCAACCAGTTTCCTGAGAAGCTAATTCCAAAGTTCATCCTGTTAGCTATGCAAGGCAAGCCTCTTCCAATTCACGGGGATGGTTCGAATGTGAGGAGTTATTTATACTGTGAAGATGTTGCAGAGGCTTTTGAAGTTATACTTCACAAAGGAGAGGTTGGCCATGTTTACAATATTGGGACCATGAAAGAAAGGAGAGTTATTGATGTAGCCAAAGATGTATGCAGACTTTTCTCAATGGACCCAGATTCCAGTATAAAATTTGTGGAGAACAGACCATTTAATGACCAGAGATACTTTCTTGATGATCAAAAGCTTAAGAACTTGGGTTGGTCTGAGAGGACCACCTGGGAAGAGGGGCTGAAGAAAACCATAGAGTGGTATACTAAGAATCCTGATTGGTGGGGTGATGTCAGTGGGGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCGGGTGGGTTGGAGAGACATTTTGAAGGCTCTGAAGAAGATAAGCCTGCATCCTATGCCTCCACTAACACTCGGATGGTGGTTCCATCGTCTAAGATCACCGGCACTCAGCAGAAACATGCCTATAAGTTCTTGATCTATGGTAGGACAGGTTGGATTGGGGGTCTGTTAGGGAAACTCTGTGAAAAACAAGGGATTCCATTTGAATATGGAAAAGGGCGCTTAGAGGATCGCTCATCACTCATGGCAGATATCCACAATGTGAAGCCTACACATGTTTTCAATGCTGCAGGAGTGACTGGCAGACCCAATGTTGACTGGTGTGAATCTCATAAAACAGAAACCATTCGCACCAATGTTGCTGGTACTTTAACACTGGCTGATGTCTGCAGAGAACAGGGGCTCTTGATGATAAATTATGCCACCGGGTGTATATTTGAGTATGATGCAGCACATCCAGAGGGTTCTGGCATTGGTTTTAAGGAGGAAGACAAGCCCAACTTCATTGGTTCTTTCTATTCCAAAACCAAAGCTATAGTTGAAGAGCTTTTGAAAGAATATGACAATGTGTGCACTCTCAGGGTTCGCATGCCAATTTCATCTGATCTGAGTAACCCACGCAACTTCATCACAAAAATTACTCGTTATAACAAAGTGGTTAACATTCCAAACAGCATGACTATCTTGGATGAACTTTTGCCTGTTTCAATTGAAATGGCAAAGAGAAACTTGCGTGGCATCTGGAACTTCACAAATCCTGGGGCTGTGAGCCACAATGAGATCCTTGAGATGTACAGGGATTACATTGATCCCAACTTCAAGTGGGTTAACTTCACACTTGAAGAGCAAGCCAAGGTGATAATTGCTCCAAGGAGCAACAATGAGATGGATGCATCGAAGTTGAAGAAAGAGTTCCCAGAGTTGCTGCCCATCAAGGAATCACTGCTGAAATACGTCTTTGAACCAAACAAGAAAACCGATAAAAAATAA 2016 0.436 MATHTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLIPSKSSANFKFVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTMKERRVIDVAKDVCRLFSMDPDSSIKFVENRPFNDQRYFLDDQKLKNLGWSERTTWEEGLKKTIEWYTKNPDWWGDVSGALLPHPRMLMMPGGLERHFEGSEEDKPASYASTNTRMVVPSSKITGTQQKHAYKFLIYGRTGWIGGLLGKLCEKQGIPFEYGKGRLEDRSSLMADIHNVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREQGLLMINYATGCIFEYDAAHPEGSGIGFKEEDKPNFIGSFYSKTKAIVEELLKEYDNVCTLRVRMPISSDLSNPRNFITKITRYNKVVNIPNSMTILDELLPVSIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPNFKWVNFTLEEQAKVIIAPRSNNEMDASKLKKEFPELLPIKESLLKYVFEPNKKTDKK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1703 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 380 661 IPR036291 -
Prci7g1703 671 Pfam GDP-mannose 4,6 dehydratase 10 315 IPR016040 -
Prci7g1703 671 Gene3D - 9 313 - -
Prci7g1703 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 332 IPR036291 -
Prci7g1703 671 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 3 338 - -
Prci7g1703 671 Gene3D - 200 322 - -
Prci7g1703 671 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 375 671 - -
Prci7g1703 671 CDD dTDP_HR_like_SDR_e 385 657 - -
Prci7g1703 671 CDD dTDP_GD_SDR_e 7 324 IPR005888 GO:0008460|GO:0009225
Prci7g1703 671 Gene3D - 374 671 - -
Prci7g1703 671 FunFam UDP-glucose 4,6-dehydratase 9 209 - -
Prci7g1703 671 NCBIfam dTDP-glucose 4,6-dehydratase 8 328 IPR005888 GO:0008460|GO:0009225
Prci7g1703 671 Pfam RmlD substrate binding domain 385 557 IPR029903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1703 Prci-Chr7 32419763 32423055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1703 8 319 Miscellaneous Gene Families AT4G00110 26.946 2.90e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1703 K12450 - gmx:100789909 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1703 7 32419763 32423055 Prci7g1703 7 32419763 32423055 ECH