Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2544 ATGAAAGGGATGGCTGCATTGCCAACTCACATAAGGCACAAGCTGAGATTGAAGAGGTTCATAGAGATTCAAAGACAGAGGGATATGATGACGGAGTATGGTCTAAAATCAGCTATGTTTATGCTAACACCAGCAGATACAAAATTCTTAGGAAAAATAAAAGCCCATTTTCGTTTCAACATTGACCCTAAATATTATGATCAACAATTAACAGCAACAGTAAATTTACCCAAGGGAACTGGAAAGTCTGTCAAGGTGGCTGTTCTTGCTCAAGGTTTACAGTTGGATGAAGCAAAAAATGCAGGGGCAGATTTTGTAGGTGGAGAGGACCTTATAGAACAGATAAAAGGAGGATTCATGGAATTTGATAAATTAATTGCTTCTCCAGATATGATGCCTAAGGTTGCTGATCTAGGGATGATCCTGAGGCCAAGGGACCTGATGCCTACTGTAAGAAATGGTACTGTGACAGCCAATATTCTTCAGGCTATAACAGAATTCAAGCTCGGAAGGATCGAATACAAGGCCGATAAAACTGGAACTCTGCATTTGCCTGTCGGAGGTGCTGACTTTTCGGAAGAGGACATATTCATGAAGTTCGCTGCTGCAGTAGAATCAATGGAAGCAAACAAACCACCTGGTGTCCAAGGTGTGCACTGGAAAAGTGCACGTCTATGCGCATCACGAAGGGGACATTGTGTTTGGTTAATCATGGAAGAGTTGCTGGATTACAAGCTTCCATCTGATATCAAAAGTTAG 759 0.4177 MKGMAALPTHIRHKLRLKRFIEIQRQRDMMTEYGLKSAMFMLTPADTKFLGKIKAHFRFNIDPKYYDQQLTATVNLPKGTGKSVKVAVLAQGLQLDEAKNAGADFVGGEDLIEQIKGGFMEFDKLIASPDMMPKVADLGMILRPRDLMPTVRNGTVTANILQAITEFKLGRIEYKADKTGTLHLPVGGADFSEEDIFMKFAAAVESMEANKPPGVQGVHWKSARLCASRRGHCVWLIMEELLDYKLPSDIKS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2544 252 NCBIfam 50S ribosomal protein L1 18 228 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Prci6g2544 252 Gene3D - 79 170 IPR016095 -
Prci6g2544 252 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 16 243 - -
Prci6g2544 252 CDD Ribosomal_L1 46 228 IPR028364 -
Prci6g2544 252 SUPERFAMILY Ribosomal protein L1 45 227 IPR023674 -
Prci6g2544 252 Pfam Ribosomal protein L1p/L10e family 47 218 IPR028364 -
Prci6g2544 252 FunFam 50S ribosomal protein L1 79 170 - -
Prci6g2544 252 Gene3D - 41 227 - -
Prci6g2544 252 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 6 233 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2544 Prci-Chr6 37066332 37071495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2544 K02863 - pop:7482305 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2544 6 37066332 37071495 Prci6g2544 6 37066332 37071495 ECH