Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2537 ATGGCGTGCATAAAAGGGGTAAATCGATCGGCATCCGTGGCTCTGGCACCGGAGGCACCGTACATGGCGGCCGGAACCATGGCGGGGGCAGTTGATATGTCCTTTAGCTCTTCTGCTAATCTCGAAATATTCAACCTTGATTTCCAGTCCGACGATCAGGAACTGCCCTTGGTCGGGGAGTGCACGAGCTCCGAGCGGTTCAATCGTCTGTCCTGGGGAAAGAGTAGTTCTGCCTCTGAAGGTTTCTCTCTTGGGCTCGTTGCTGGTGGGCTGGTGGATGGAAATATTGGCCTCTGGAATCCTCTCACCCTGATCCGTTCGGAGGTAAAAGAAAGTGCTTTTCTTCAGCATCTTCTGAGGCATAAAGGGCCAGTCCGTGGTCTCGAGTTTAATACCATTGCCCCCAATCTTCTTGCATCTGGGGCTGATGATGGTGAAATTTGCATTTGGGATTTGGCCAATCCTTCAGAGCCATCTCATTTTCCACCTCTCAGGGGTACTGGCTCTGCTTCCCAGGGTGAAATTTCATTCTTATCTTGGAATAGCAAAGTCCAACACATATTAGCATCAACTTCATATAATGGGACCACTGTTGTCTGGGACCTAAGGAAGCAAAAGCCGGTGATAAGCTTTGCAGATTCTGTTAAAAGACGATGTTCAGTTTTGCAGTGGAATCCTGATTTTGCCACTGAGCTAGTTGTTGCATCAGATGAAGATGGTTCTCCTGCTGTGAGGCTTTGGGATATGAGGAATATAATGGCACCAATTAAAGAGTTTGTGGGACACAGCAGAGGTGTAATTGCAATGTCTTGGTGTCCCTATGATAGCTATTATTTAGTTACCTCTGCCAAAGATAGTCGTACCATATGCTGGGACACAACTTCTGGAGAGATTGTACGTGAATTGCCTGCTGGGACCAACTGGAATTTTGATGTGCATTGGTATTCTAAAATACCTGGAGTAATTTCAGCATCTTCCTTTGATGGAAAAATTGGCTTCTACAATGTTGAGGGCTGCAGTCGGCATGATGCTGGGCAAAATGATTTTGGGACAGTATCTCTAAGAGCTCCAAAATGGTACAAACGCCCAGTTGGGGTGTCTTTTGGTTTTGGTGGCAAGCTTGTATCATTTAATACCAAGTCATCTGCCACAAATGCTCCTGCTGGGCCTTCAGAGGTTTATGTGCATAATATGGTTACTGAACAAAGTCTAGCGAGTCGTTCCTCTGAATTTGAAGCCGCAATACATAATGGGGAAAGGTCTTTGCTGAGGGTTTTATGTGACAAGAAGTTTCAGGAATCAGAATCTGATGAAGAAAGAGAAACATGGGGCTTCTTAAAGGTTATGTTTGAAGATGATGGGACAGCACGAACGAAGCTGCTTGCACACCTTGGTTTTACTGTACCTATTGAAGAAAAAGACACAGCTGTAGATGATCTTGCACAAGAAGTCAGTGCTATTGGACTTGATGAGACAGCTGTTGATAAAGTAGGACTTGGGCCTGAAAATGAATCTACTGCTTTCCCAGATACTGGGGAGGATTTCTTTAACAATCTTCCTAGTCCGAAAGCTGATACACCCGTATCTACTTCTGGGGGTAATGTGGATTATGCCAATGGTTTGGACAAAACCCAAGAAGAGATAGAAGTAGAGGAGAGTAATGACCCTACATTTGATGATAGTGTTCAGCGTGCATTAGTTGTTGGGGACTACAAAGGGGCAGTTACGCAATGCATATCTGCAAATAAGTGGGCTGATGCTCTAGTTATTGCTCATGTAGGTAGTGCTTCACTATGGGAGAGTACACGAGACCAATACCTTAAGAGAATCAGATCACCATACTTGAAGGTTGTGTCTGCAATGGTGAACAAGGATCTCTTAAGCCTTGTGAATACCAGGCCTCTAAAATTTTGGAAAGAAACTCTTGCTCTTCTTTGTAGTTTTGCTCAGAGAGATGAATGGACAATGCTTTGTGACACACTTGCTTCAAAACTCAAGGAAACTGGAAATACATTAGCTGCAACTCTCTGTTATATATGTGCTGGCAATATTGACAAAACACTTGAAATTTGGTCAAAGAATCTGCAAACTGAGCATGAAGGAAGATCATATGTTGATGTTCTCCAGGATTTGATGGAAAAAACGATTGTTCTTGCCTTAGCAACTGGGCAGAAGCAATTTAGTGCATCTCTTTGCAAGCTTGTGGAGAAATATGCTGAAATTTTAGCAAGTCAAGGACTGTTGACTACAGCAATGGAGTATATAAAGCTTTTGGGTTCTGCTGAACTGTCACCTGAACTTCTAGTCTTAAAAGATCGGATTTCTCTTTCTACACAACCAGAGAAAGAAGTCCAGACTACTGTGCTTGAAAATACTCAGCCACAAAGTGGATCATTTTATGGTGCTGATAATTCCAATTATACTAGAAATTATTATCAGGAGTCAGTTTCCCCACAAGTGCGGCATGGTTCTTCTGGAGTTCCATATGATGAAAACTATCAACAGCCTTTTAATCCTTCATATGGAAGAGGATATGCTGGTTCTGCTCCATTTCAGCAACCTCAACAACCTAATTTGTTTGTTCCATCACAGGCACCTCAGGTTCACCAAGCACCTCAGCCAAACTTATCTACTGCTCCTGTCACACAACCTCCTATGAGATCTTTTGTTCCTCACACTCCTCCAGCTCTAAGAAATGTCGAGCAATATCAGCAGCCAACGTTGGGTTCTCAGTTGTATCCTGGAGCTGTCAATCCACCTTACCAACCTACACCCCTTGCCACTTCTCAAATGGGCCTGGTTCATGGCCAGAAGTTGCCACAGGTTGTGGCGCCAACCCCGAGTCCAAGGGGATTCACCCCGGTCTCCAGTTCTGGTGTTGTGCAAAGACCTGGAATTGGATCGATTCAGCCTCCCAGTCCCCCTCAGGCAGCTCCTGCACAGCCAGCTCCAGCACCAGCTGCTCCACCTCCAACTGTGCAAACAGCTGATACTTCAAATGTGCCTGTGCACCAAAAGCCCATTGTCGCAACATTGACAAGGCTTTTCAACGAGACATCAGAAGCACTGGGAGGTTCACGTGCAAATCCAGCTAAAAAGCGGGAGATAGAAGACAACTCAAGGAGAATCGGAGGATTATTTGCGAAATTGAACAGTGGGGACATCTCTAAAAATGCCTCAGATAAGCTCCTTCAGCTCTGTCAGGCATTAGACAAAGGCGATTTCAGTACTGCCCTACAAATTCAGGTACTACTTACTACAACCGAATGGGACGAATGCCAGTCCTGGCTCGGTTCGCTGAAGCGAATGATTAAGACAAGGCAGAGTGTGAGATAA 3336 0.4487 MACIKGVNRSASVALAPEAPYMAAGTMAGAVDMSFSSSANLEIFNLDFQSDDQELPLVGECTSSERFNRLSWGKSSSASEGFSLGLVAGGLVDGNIGLWNPLTLIRSEVKESAFLQHLLRHKGPVRGLEFNTIAPNLLASGADDGEICIWDLANPSEPSHFPPLRGTGSASQGEISFLSWNSKVQHILASTSYNGTTVVWDLRKQKPVISFADSVKRRCSVLQWNPDFATELVVASDEDGSPAVRLWDMRNIMAPIKEFVGHSRGVIAMSWCPYDSYYLVTSAKDSRTICWDTTSGEIVRELPAGTNWNFDVHWYSKIPGVISASSFDGKIGFYNVEGCSRHDAGQNDFGTVSLRAPKWYKRPVGVSFGFGGKLVSFNTKSSATNAPAGPSEVYVHNMVTEQSLASRSSEFEAAIHNGERSLLRVLCDKKFQESESDEERETWGFLKVMFEDDGTARTKLLAHLGFTVPIEEKDTAVDDLAQEVSAIGLDETAVDKVGLGPENESTAFPDTGEDFFNNLPSPKADTPVSTSGGNVDYANGLDKTQEEIEVEESNDPTFDDSVQRALVVGDYKGAVTQCISANKWADALVIAHVGSASLWESTRDQYLKRIRSPYLKVVSAMVNKDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLKETGNTLAATLCYICAGNIDKTLEIWSKNLQTEHEGRSYVDVLQDLMEKTIVLALATGQKQFSASLCKLVEKYAEILASQGLLTTAMEYIKLLGSAELSPELLVLKDRISLSTQPEKEVQTTVLENTQPQSGSFYGADNSNYTRNYYQESVSPQVRHGSSGVPYDENYQQPFNPSYGRGYAGSAPFQQPQQPNLFVPSQAPQVHQAPQPNLSTAPVTQPPMRSFVPHTPPALRNVEQYQQPTLGSQLYPGAVNPPYQPTPLATSQMGLVHGQKLPQVVAPTPSPRGFTPVSSSGVVQRPGIGSIQPPSPPQAAPAQPAPAPAAPPPTVQTADTSNVPVHQKPIVATLTRLFNETSEALGGSRANPAKKREIEDNSRRIGGLFAKLNSGDISKNASDKLLQLCQALDKGDFSTALQIQVLLTTTEWDECQSWLGSLKRMIKTRQSVR 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2537 1111 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 160 IPR001680 GO:0005515
Prci6g2537 1111 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Prci6g2537 1111 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Prci6g2537 1111 MobiDBLite consensus disorder prediction 780 887 - -
Prci6g2537 1111 MobiDBLite consensus disorder prediction 950 964 - -
Prci6g2537 1111 MobiDBLite consensus disorder prediction 968 991 - -
Prci6g2537 1111 PANTHER SEC31-RELATED PROTEIN 3 1108 IPR040251 GO:0006888
Prci6g2537 1111 Gene3D - 1 337 IPR015943 GO:0005515
Prci6g2537 1111 FunFam Protein transport protein SEC31 homolog B 997 1111 - -
Prci6g2537 1111 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Prci6g2537 1111 Gene3D Functional domain of the splicing factor Prp18 997 1111 - -
Prci6g2537 1111 MobiDBLite consensus disorder prediction 780 841 - -
Prci6g2537 1111 FunFam Protein transport protein SEC31 homolog B 353 778 - -
Prci6g2537 1111 SUPERFAMILY WD40 repeat-like 14 337 IPR036322 GO:0005515
Prci6g2537 1111 Gene3D - 351 778 - -
Prci6g2537 1111 FunFam Protein transport protein SEC31 homolog B 1 337 - -
Prci6g2537 1111 Pfam WD domain, G-beta repeat 116 151 IPR001680 GO:0005515
Prci6g2537 1111 MobiDBLite consensus disorder prediction 849 884 - -
Prci6g2537 1111 SMART WD40_4 204 248 IPR001680 GO:0005515
Prci6g2537 1111 SMART WD40_4 252 292 IPR001680 GO:0005515
Prci6g2537 1111 SMART WD40_4 295 335 IPR001680 GO:0005515
Prci6g2537 1111 SMART WD40_4 54 100 IPR001680 GO:0005515
Prci6g2537 1111 SMART WD40_4 161 201 IPR001680 GO:0005515
Prci6g2537 1111 SMART WD40_4 112 151 IPR001680 GO:0005515
Prci6g2537 1111 Pfam Sec23-binding domain of Sec16 562 760 IPR024298 -
Prci6g2537 1111 MobiDBLite consensus disorder prediction 941 1003 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2537 110 337 Miscellaneous Gene Families AT5G08390 23.043 2.27e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2537 K14005 - gmx:100788642 1762.66