Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2536 ATGGAAATTCTATCGTATGGTTCGGCATCATGCTGTTATGTAGTGAACTTGAAGTCGAAATTGAGTGGAAGATGCTTCAATTCCCGACAATTAGGATTTCCCACTGCTGGAAATCAAGGAATTCATAATAATAACATCATTTCTAGGTTCAATAACATGGAAAGAGGTTGTAGATCCTTAAATAATCTTAAAGGCTTTAAAGAAAATAATTCCAAGGTTTATAGTGGAGGCTATGATGGTTTTGTGGTTGATGGTGAAGGGGTTGTAAGAGATATATCAGGAATAGAACAACCTGCAACCAAGGTTCTCATTCCTGGTTTGCCAAATGAGCTGAAGAGGGAGTCTGGTGCCATGATAAGAAGTTGCTTCTGGGAGTGGAAGCCAAAGCTTAACGTGCACTATGAAAAGGCCGGGTGTGAAAATTTGGAATCCCCGCAGATTCTCTTTCTTCCCGGTTTTGGTGTTGGTTCTTTCCATTATGAGAAGCAAATGAAGGATTTGGGCCGTGACTTTAGAGTATGGTCACTGGATTTTCTTGGTCAAGGGATGTCGCTGCCTTTTGAAGATCCCACATTTCAGTCTAAAGCAGTGGGTGCATCTAATGGTAAATCTTCTTCGTGGGGTTTTGGGGATGAAACTGAACCATGGGCAGAAAAGCTTGTGTACTCTATGGATTTGTGGCAGGATCAAGTTCGCTACTTCATAGAAAAGGTAATTGGTGAACCAGTCTATATTGTGGGCAACTCATTAGGAGGATTTGTTGCATTGTATTTTGCAGCATGCAATCCTCATTTAGTTAAGGGTGTCACATTGCTTAATGCAACACCGTTTTGGGGGTTTTTGCCCAATCCTGTGAGAAATCCAGGACTTGCAAAATTATTTCCATGGGCAGGAACATTTCCTCTACCACCACGTGTGAAGAGTCTGACAGAGTTGTTGTGGGAGAAAATTAGTGATCCAAGAAGCATCGCTGAGATACTTAAGCAGGTTTATGCAGATCATTCAACGAAGGTAGATAATGTGTTTTTGCGTATAATTGAAACAACAAGGCATCCAGCTGCTGCTGCATCATTCGCTTCAATTATGTTTGCTCCTCAGGCAGAATTGTCCTTTGACGAGGCATTATCTAAATGTCGAGCCAACAATGTGCCCATCTGCCTCATGTATGGCAAAGAAGATCCCTGGGTGAGGCCAATTTGGGGACTTCAGGTTAAAAAGAAGGTTCCTAAAGCTCCATATTATCAAATCAGCCCGGCCGGTCACTGTCCTCATGATGAAGTCCCTGAGGTCATAAATTTCTTGCTACGTGGGTGGATAAAGAACCTGGAGTCTCAAGGCTGTTTCTCACTACCTCTGCTTGAGGACTCGGACAGCACAAAATTCACTGTTGTCAAGCAGTTAGAATTTATCAGAGAAGACTCAAAAAAGTCAGTCATGGTTAGGTATCTAGGCAATAGTTTAACTTTAACACTTTGGGACAGGATCAGATCTTACATCAATTCTCAGGCCAAGCTCAGGGACGTGGCACTCAAATCTCAGTGA 1542 0.4235 MEILSYGSASCCYVVNLKSKLSGRCFNSRQLGFPTAGNQGIHNNNIISRFNNMERGCRSLNNLKGFKENNSKVYSGGYDGFVVDGEGVVRDISGIEQPATKVLIPGLPNELKRESGAMIRSCFWEWKPKLNVHYEKAGCENLESPQILFLPGFGVGSFHYEKQMKDLGRDFRVWSLDFLGQGMSLPFEDPTFQSKAVGASNGKSSSWGFGDETEPWAEKLVYSMDLWQDQVRYFIEKVIGEPVYIVGNSLGGFVALYFAACNPHLVKGVTLLNATPFWGFLPNPVRNPGLAKLFPWAGTFPLPPRVKSLTELLWEKISDPRSIAEILKQVYADHSTKVDNVFLRIIETTRHPAAAASFASIMFAPQAELSFDEALSKCRANNVPICLMYGKEDPWVRPIWGLQVKKKVPKAPYYQISPAGHCPHDEVPEVINFLLRGWIKNLESQGCFSLPLLEDSDSTKFTVVKQLEFIREDSKKSVMVRYLGNSLTLTLWDRIRSYINSQAKLRDVALKSQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2536 513 FunFam Pheophytinase, chloroplastic 115 442 - -
Prci6g2536 513 Pfam Alpha/beta hydrolase family 147 430 IPR000073 -
Prci6g2536 513 Gene3D alpha/beta hydrolase 112 442 IPR029058 -
Prci6g2536 513 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 504 IPR044211 GO:0015996|GO:0080124
Prci6g2536 513 SUPERFAMILY alpha/beta-Hydrolases 130 440 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2536 Prci-Chr6 36893353 36897569 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2536 - - gmx:100791985 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2536 6 36893353 36897569 Prci6g2536 6 36893353 36897569 ECH