Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2528 ATGCGGATTGATGATAATGGGTTGACTCAGCCACCCACAACTTCTTTAAATTCTGGCACCACCCCTTCAATTCCTTCGCTCTCTATCACTTCCCTCCTTTTGTTCTTGCTCACAAAGAAACAACAAAGGCCTTCATACATGATTCGACTTCTTCTGCCTTCAACTACCCTCGTATCCATCGACAGGAAAATGAGACCCCCATCGCTTGGTCTAGTTAAGGAACACAACATTCTGTTCCTTAAAGGCTTCATGATCCTGTTGTTCAGTTTCATAACAATTCGACTTAACTTCTGTGTTTCCAGTATCCCTTATTCGTTAAAAACACTTCCCCTTGAAGGTCATTTCAATTTTGATGATGTTAGCTATGCGGCCAGGGATTTTGGCAACAGGTATCAATATTATCCAATGGCCGTGCTGCATCCAAAATCAGTATCCGATATTGCAGTCATCATCAAGCATATCTGGAAGATAGGTCCTAGTTCCCAGCTCACCGTTGCAGCCAGAGGCCATGGTCACTCACTCCAGGGACAGGCACAAGCTCATGGAGGAGTTGTGATCAACATGGAATCACTCAAGTCCCCTGAAATGCAGGTTTACGCAGGAAATTCTCCATATGTAGATGTCAATGGTGGCGAGCTGTGGATAAACATCCTGCGAGAGAGTCTAAGATATGGGTTAGCACCAAGATCATGGACAGATTACCTGCATCTTACAGTTGGTGGCACTCTGTCTAATGCTGGAATCAGTGGACAGGCATTTCGTCATGGTCCCCAAATAAGCAACGTCCAGCAGCTGGAGATAGTAACAGGAAAAGGGGAGGTGGTAAATTGTTCTGCGGAGCAGAATGGTGAACTCTTTCACAGTGTACTTGGGGGGCTTGGTCAGTTTGGCATCATAACCCGGGCAAGAATAGTCCTCGAACCAGCACCTACTAAGGTAAAATGGATTAGATTGCTATATGCAGATTTCACAGAATTTACGAGAGATCAGGAGAAGTTAATATTTGCAGAAAGCATATTCGATTACATTGAGGGATTTGTGATCATAAACAAAACTGGTCTGCTGAACAACTGGAGATCATCCTTCAAACCACAAGACCCAGTTCAAGCTAATCAGTTCAAGTCAGATGGAAGAACTCTCTTCTGCCTAGAATTGGCCAAATACTTCAGTCTGGAAGATTCTGATGCGGTAAATGAGGAAGTTGAAGAACATTTGTCCCACTTAAACTATATCCCATCAACACTTTTTCTAACGGAAGTCACATATGTTGATTTCTTAGACAGAGTCCATGTCTCTGAGGTCAAATTGCGGTCAAAAGGCTTGTGGGACGTTCCACACCCGTGGCTCAATCTTTTCATACCCAGAAGCAAAGTACACGACTTTGCTGAAGGTGTCTTTGGGAAGATCTTGAGAGAAACAAGCAATGGTCCAATTCTCATCTACCCAGTAAACAAATCAAAGTGGGACAACAGAACTTCTGTAGTAATTCCTGACGAAGACATTTTCTACTTAGTGGCATTTCTGACCTCTGCACTTCCTTCTTCCAATGGATCTGATGGCCTCGAACATATTTTAACTCAAAATAAAAGAATTCTAGAATACTGTGAAAGTGCCCGTCTTGGGGTAAAGCAATATTTGCCTCACTACACTACACAGGAAGAATGGAGGGCCCACTTTGGTCCTCGGTGGGAGGCATTTCTGCAGAGAAAATCTGCTTATGACCCCTTGGCAATGCTTGCACCTGGCCAACGTATATTTCAAAAAGCAATATCCTTCTCTTGA 1782 0.4355 MRIDDNGLTQPPTTSLNSGTTPSIPSLSITSLLLFLLTKKQQRPSYMIRLLLPSTTLVSIDRKMRPPSLGLVKEHNILFLKGFMILLFSFITIRLNFCVSSIPYSLKTLPLEGHFNFDDVSYAARDFGNRYQYYPMAVLHPKSVSDIAVIIKHIWKIGPSSQLTVAARGHGHSLQGQAQAHGGVVINMESLKSPEMQVYAGNSPYVDVNGGELWINILRESLRYGLAPRSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVQQLEIVTGKGEVVNCSAEQNGELFHSVLGGLGQFGIITRARIVLEPAPTKVKWIRLLYADFTEFTRDQEKLIFAESIFDYIEGFVIINKTGLLNNWRSSFKPQDPVQANQFKSDGRTLFCLELAKYFSLEDSDAVNEEVEEHLSHLNYIPSTLFLTEVTYVDFLDRVHVSEVKLRSKGLWDVPHPWLNLFIPRSKVHDFAEGVFGKILRETSNGPILIYPVNKSKWDNRTSVVIPDEDIFYLVAFLTSALPSSNGSDGLEHILTQNKRILEYCESARLGVKQYLPHYTTQEEWRAHFGPRWEAFLQRKSAYDPLAMLAPGQRIFQKAISFS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2528 593 Gene3D - 312 545 IPR016170 -
Prci6g2528 593 MobiDBLite consensus disorder prediction 1 22 - -
Prci6g2528 593 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 135 170 IPR006093 GO:0016491
Prci6g2528 593 MobiDBLite consensus disorder prediction 7 22 - -
Prci6g2528 593 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 310 586 IPR015345 GO:0009690|GO:0019139|GO:0050660
Prci6g2528 593 Pfam FAD binding domain 135 278 IPR006094 GO:0050660
Prci6g2528 593 Gene3D - 119 586 IPR016167 -
Prci6g2528 593 FunFam Cytokinin dehydrogenase 1 185 311 - -
Prci6g2528 593 FunFam Cytokinin dehydrogenase 2 312 545 - -
Prci6g2528 593 PANTHER GULONOLACTONE OXIDASE 83 587 - -
Prci6g2528 593 SUPERFAMILY FAD-linked oxidases, C-terminal domain 310 586 IPR016164 GO:0003824|GO:0050660
Prci6g2528 593 Gene3D - 188 311 IPR016169 -
Prci6g2528 593 ProSiteProfiles PCMH-type FAD-binding domain profile. 131 309 IPR016166 GO:0071949
Prci6g2528 593 SUPERFAMILY FAD-binding/transporter-associated domain-like 115 308 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2528 Prci-Chr6 36785537 36788226 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2528 K00279 - gmx:100797430 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2528 6 36785537 36788226 Prci6g2528 6 36785537 36788226 ECH