Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1868 ATGGCTGAAGAGCCCCAGAAATCGGTTGAGGAAGTGGCAGTAGCAGTGGCGGAGAAATCCGTTGTTGAAGAGAAAGAGCCCGAGAAGCCGGTCATCGAAGCAGAGCCTGAGAAGCCAATCGCTGAGAGCGAGAAAAAAGATGAAGAGAAGCCGGCGGGCCCCACTGAGGAAGCTGTCGAGGAGAAGAAGCCGAAGGCCCCAGTAGAAGAAAGAAAGATTACCCAGTCTGTTTCTTTCAAGGAGGAGACCTATGTAGTCGCCGACCTCCCTGAAGCTCAGAAGAAGGCCCTTGATGAGCTGAAACAGCTTATTCAAGAAGCATTAAACAAGCACGAGTTCACTGCTCCGCCGCCGCCTCCTCCGCCGCCGGCCAAGGAGGAGGAAGAGAAGAAGGCCCCGGAGGAGGAGAAGAAGGAGGAAGAAAAACCGGCTGCAGTTGAAGAAAAAACTGAAGCAGAGCCTTCTAAGGAGGTTGCTGTTTTTGAAGAGCCGGCAAAGGTTGAGGCTGCAACAGTTTCTGAACAGAAAAAGGAAGAGGAGAAGCCTGCACCTGAAGCTCCGGTCGTCGCGGAGGCTGTTGAAACCGTCACTGAAGAGAAAAAGGAGGAGGAGAAGCCTACACCTGAAGTTGCTGTTGTCACGGAGGTGGTTGAGAAAGTTTCTACTGAAATACAGGCTGATTCTAAGACGGTAGAAACAATCAAAGAGACCATAGTGTCAGTCTCTGAGGAGGCAGCACCTGAAACTAAGGATGGCGAGGCCGCTGCTCCGCCACCAGAAAAGGCGGCGCCAGAAGCGAAAGTCGGGGAGGAGGTCCCAGCGCCGCCTCCGCCTCCACCAGAGGAGGTTTCAATCTGGGGAATTCCCCTGCTTGCGGATGAGAGGAGTGATGTGATACTCCTGAAATTCTTGAGAGCAAGGGATTTCAAAGTGAAGGACGCCTTCACGATGATCAAGAACACCGTTCGTTGGCGAAAGGAATTCGGAATCGACGCACTCGTCGAGGAAGATCTTGGGAACGATTGGGACAAGGTGGTGTTCACTCATGGGTATGACAAACAAGGCCATTCTGTTTGCTACAACGTGTTTGGTGAGTTCGAGAACAAGGAATTGTATCAGAGCACGTTTTCCGATGAGGAGAAGCGCCAGAAGTTCATCAGATGGAGGATTCAGTTCTTGGAGAAGAGCGTTAGAAAATTTGACTACGCTCCTACTGGAATTTCTACAATTGTCCAGGTCAATGATCTTAGGAATTCGCCTGGATTGGGCAAGAAAGAACTCAGGCAAGCCACTAATCAGGCCCTTCATTTGCTTCAGGATAACTATCCTGAGTTCTTAGCCAAGCAGGTGTTTATCAATGTCCCATGGTGGTACCTGGCCTTTGCAAGGATGATCAGTCCATTCCTGACTCAGAGGACCAAAAGCAAATTTGTATTTGCTGGTCCATCGAAATCTGCTGAAACCCTTTTCAAATACATAGCTCCTGAGCATGTGCCTGTTCAGTATGGTGGATTGAGCAGGGAGGGTGACTATGAATTCACAACTGCTGACTCTGTTACTGAGTTTACTATTAAACCATCAACAAAACATATTATTGAATTCCCCGCTTCTGAGCCGACCCATCTGTTTTGGGAACTGAGAGTTGTGGGTTGGGATGTGAGCTATGGTGCTGAATTCGTGCCGAGTGCTGAAGATAGATACACTGTGATCGTACAGAAGAGCCGGAAAATTGGAGTTGCAGATGAAACTATAATCTCTAATGACTTTAAAATCGGGGAAGCCGGTAAGGTCGTGCTCACCATTGATAATCAGACATCGAAGAAGAAGAAGTTGCTGTACAGGTCCAAGACCAAACCCCTCTCTGAGTGA 1869 0.4922 MAEEPQKSVEEVAVAVAEKSVVEEKEPEKPVIEAEPEKPIAESEKKDEEKPAGPTEEAVEEKKPKAPVEERKITQSVSFKEETYVVADLPEAQKKALDELKQLIQEALNKHEFTAPPPPPPPPAKEEEEKKAPEEEKKEEEKPAAVEEKTEAEPSKEVAVFEEPAKVEAATVSEQKKEEEKPAPEAPVVAEAVETVTEEKKEEEKPTPEVAVVTEVVEKVSTEIQADSKTVETIKETIVSVSEEAAPETKDGEAAAPPPEKAAPEAKVGEEVPAPPPPPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDALVEEDLGNDWDKVVFTHGYDKQGHSVCYNVFGEFENKELYQSTFSDEEKRQKFIRWRIQFLEKSVRKFDYAPTGISTIVQVNDLRNSPGLGKKELRQATNQALHLLQDNYPEFLAKQVFINVPWWYLAFARMISPFLTQRTKSKFVFAGPSKSAETLFKYIAPEHVPVQYGGLSREGDYEFTTADSVTEFTIKPSTKHIIEFPASEPTHLFWELRVVGWDVSYGAEFVPSAEDRYTVIVQKSRKIGVADETIISNDFKIGEAGKVVLTIDNQTSKKKKLLYRSKTKPLSE 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1868 622 Gene3D - 344 521 IPR036865 -
Prci6g1868 622 SUPERFAMILY CRAL/TRIO domain 345 506 IPR036865 -
Prci6g1868 622 CDD SEC14 340 505 IPR001251 -
Prci6g1868 622 PANTHER PATELLIN-1 127 619 IPR044834 GO:0008289
Prci6g1868 622 SMART sec14_4 339 507 IPR001251 -
Prci6g1868 622 MobiDBLite consensus disorder prediction 17 77 - -
Prci6g1868 622 MobiDBLite consensus disorder prediction 123 185 - -
Prci6g1868 622 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 335 510 IPR001251 -
Prci6g1868 622 ProSiteProfiles GOLD domain profile. 512 617 IPR009038 -
Prci6g1868 622 SMART CRAL_TRIO_N_2 296 321 IPR011074 -
Prci6g1868 622 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 518 614 IPR036598 -
Prci6g1868 622 PRINTS Cellular retinaldehyde-binding protein signature 299 321 - -
Prci6g1868 622 PRINTS Cellular retinaldehyde-binding protein signature 462 481 - -
Prci6g1868 622 Pfam CRAL/TRIO, N-terminal domain 281 320 IPR011074 -
Prci6g1868 622 MobiDBLite consensus disorder prediction 16 82 - -
Prci6g1868 622 MobiDBLite consensus disorder prediction 194 209 - -
Prci6g1868 622 Pfam CRAL/TRIO domain 344 504 IPR001251 -
Prci6g1868 622 MobiDBLite consensus disorder prediction 98 209 - -
Prci6g1868 622 Gene3D - 280 327 - -
Prci6g1868 622 MobiDBLite consensus disorder prediction 242 280 - -
Prci6g1868 622 SUPERFAMILY CRAL/TRIO N-terminal domain 86 337 IPR036273 -
Prci6g1868 622 Gene3D GOLD domain 522 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1868 Prci-Chr6 16852900 16856788 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1868 300 484 Acyl Lipid Metabolism Gene Families AT5G47730 28.218 2.72e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1868 - K19996 qsa:O6P43_029975 691.034