Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1658 ATGGGTCAAGCTTTCCGAAAGCTCTTTGACGCCTTCTTCGGGAACTCCGAGATGCGGGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTGTACAAGCTGCATATTGGAGAAGTTTTATCGACTGTCCCTACTATTGGTTTCAATGTGGAGAAAGTTCAGTATAAGAATGTTATATTCACAGTTTGGGATGTAGGAGGGCAAGAAAAATTAAGGCCACTTTGGAGGCACTATTTTAACAATACAGACGGTTTGATATATGTTGTTGATAGCCTGGACCGAGAGAGAATTGGAAAAGCAAAGCAGGAATTTCAGGCTATCATAAGTGATCCGTTCATGCTCAATAGTGTCATTTTGGTTTTTGCCAACAAACAAGACATGAAAGGAGCAATGACGCCAATGGAAGTATGTGAAGGACTAGGTCTCTTTGAACTCAAGAATAGAAAATGGCACATACAAGGAACTTGTGCGCTTAGGGGAGATGGCCTTTATGAGGGCTTGGACTGGTTGGCTGCAACTCTGAAGGAGAGAAATGCTGCTGGATACTCTTCACTAGGAACCTCATCTTTCTAA 582 0.4261 MGQAFRKLFDAFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIISDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFELKNRKWHIQGTCALRGDGLYEGLDWLAATLKERNAAGYSSLGTSSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1658 193 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Prci6g1658 193 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Prci6g1658 193 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Prci6g1658 193 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Prci6g1658 193 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Prci6g1658 193 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Prci6g1658 193 SMART sar_sub_1 3 177 IPR006689 GO:0003924|GO:0005525
Prci6g1658 193 FunFam ADP-ribosylation factor 2 4 186 - -
Prci6g1658 193 NCBIfam small GTP-binding protein domain 16 136 IPR005225 GO:0005525
Prci6g1658 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Prci6g1658 193 SMART arf_sub_2 1 181 - -
Prci6g1658 193 PANTHER ADP RIBOSYLATION FACTOR-RELATED 8 176 IPR024156 GO:0005525
Prci6g1658 193 Pfam ADP-ribosylation factor family 7 176 IPR006689 GO:0003924|GO:0005525
Prci6g1658 193 Gene3D - 4 186 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1658 Prci-Chr6 13607292 13612797 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1658 K07937 - cit:102609009 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1658 6 13607292 13612797 Prci6g1658 6 13607292 13612797 ECH