Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1612 ATGGCTTCAAGATCATTCAAGGCAAGCCGATCATCTCTGTCAACAAGTTCTGATGTGCCTGATGGCCAGAAGCCTCCTCTGCCTCCAACTGTAACATTTGGCCGGAGAACTTCATCTGGTCGATATATCAGTTACTCTAGGGATGATCTTGACAGTGAGCTAGGCAGTAGTGATTTCATGAATTATACAGTGCATTTACCACCAACGCCGGATAACCAACCTATGGATCCATCAATCTCGCAGAAAGTTGAGGAGCAATATGTGTCAAACTCTCTCTTCACTGGTGGGTTCAATAGTGTTACACGAGCCCATCTAATGGACAAAGTGATAGAATCTGAAGCAAACCACCCACAGATGGCTGGTGCAAAAGGATCTTCTTGTGCAATTCCTGGTTGTGATTCAAAGGTGATGAGTGATGAACGTGGTGTTGATATTCTTCCTTGTGAGTGTGATTTCAAGATATGTAGAGATTGTTATATAGATGCTGTAAAAACAGGAGGTGGCATGTGCCCAGGATGCAAGGAGCCATATAAAAACACAGATTTGGATGAAGTGGCTGTGGATAATGCGAGGCCTCTTCCACTTCCTCCACCAGGTGGAATGTCTAAAATGGAGAGGAGATTATCCTTAATGAAGTCAACTAAGTCAGCACTAATGAGGAGCCAAACTGGAGACTTTGACCACAATCGGTGGCTCTTTGAAACAAAGGGGACCTATGGCTATGGAAATGCCATATGGCCAAAGGAAGGCGGGCTTGGGAATGGAAAAGAGGATGATGTTACTGACCCAACTGAATTCATGAACAGACCTTGGAGACCACTTACAAGGAAACTGAAAATACCTGCTGCTATTTTGAGCCCATATCGTCTTCTTATTTTAATTCGTATGGCTGTTCTGGCCTTGTTCTTGGCATGGAGGGTGAAGCATCCAAATACTGATGCAATCTGGCTATGGGGCATGTCTGTTGTTTGTGAGATATGGTTTGCTTTTTCTTGGCTTCTGGATCAACTGCCCAAGCTATGCCCCATTAATCGTGCCACAGATCTTAATGTCTTGAAGGAAAAATTTGAGGCACCAACCCTTAACAATCCGACTGGAAAGTCTGATCTCCCAGGAATAGATGTCTTTGTTTCTACTGCTGATCCTGAGAAAGAACCTCCTCTTGTCACTGCAAATACTATCTTGTCTATTTTAGCTGCTGATTATCCAGTTGAGAAGCTTTCTTGCTATGTGTCTGATGATGGAGGTGCACTTCTAACTTTTGAGGCTATGGCTGAAGCTGCAAGCTTTGCTAATATATGGGTACCCTTCTGTCGTAAGCATGATATAGAGCCCAGGAATCCCGAGTCATACTTTAATTTGAAGAGAGATCCTTATAAGGACAAAGTGCGGCCAGATTTTGTCAAGGATCGTAGACGGGTGAAGCGTGAGTATGATGAGTTCAAGGTCAGAATCAATAGTCTTCCTGACTCTATCCGTCGCCGATCGGATGCCTATCATGCAAGAGAGGAAATCAAGGCCATGAAACTTCAAAGACAACACAGAGAAGATGAACCTGTTGAAAGTGTAAAGATTCCAAAAGCCACATGGATGGCTGATGGAACTCATTGGCCAGGGACTTGGTTAAATTCTGCACCTGAGCACTCTAGGGGTGATCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCTAGTGATGACCCTCTTCTTGGAAGTGCTGATGATTCGAAGCTCATTGACTTGACTGATGTTGATATGCGTCTGCCCCTTCTTGTTTATGTTTCCCGTGAGAAGCGTCCAGGTTATGATCACAACAAAAAAGCAGGCGCTATGAATGCCTTGGTTCGAGCATCAGCTATAATGTCTAATGGCCCCTTTATACTCAATCTTGACTGTGATCATTATATCTACAACTCAAAGGCAATGAGGGAAGGTATGTGCTTCATGATGGATCGTGGAGGTGATCGCCTTTGTTATGTCCAGTTCCCACAGAGGTTTGAGGGGATTGATCCCTCTGATCGGTATGCTAATCATAATACAGTCTTCTTTGATGTCAACATGAGAGCTCTTGATGGACTTCAAGGTCCAGTCTATGTGGGAACTGGGTGTCTTTTTAGACGGGTTGCCCTTTATGGCTTTGACCCACCTCGTGCAAAAGAAAACCACCCAGGTTGTTGTAGTTGCTGCTTTGGCCGTCGCAAGAAGCATGCCTCAATGGCAAACAGCAATGAAGAGAATCGGGCATTGAGGATGGGTGATTCTGATGATGAAGAGATGGATCTTTCAACATTCCCTAAAAAATTTGGAAACTCAACTTTCCTCATTGACTCAATCCCAGTGGCAGAGTTCCAAGGCCGGCCTCTTGCTGATCACCCTGCTGTGAAAAATGGTCGCCCACCTGGTGCTCTCACCATTCCCCGTGATCTTCTTGATGCATCGACAGTGGCAGAGGCAATCAGTGTCATCTCATGCTGGTATGAAGACAAAACTGAGTGGGGAAATCGTGTTGGATGGATCTATGGGTCTGTTACTGAGGATGTGGTTACTGGGTATAGGATGCACAATAGGGGATGGAAATCTGTATACTGTGTGACCAAGCGAGATGCCTTCCGTGGAACTGCTCCAATCAATCTCACAGACAGGTTGCACCAGGTCCTTCGATGGGCTACAGGCTCAGTTGAGATATTCTTCTCTCGAAACAATGCCCTTCTAGCAAGCTCGAAAATGAAGCTTCTTCAACGAATTGCATACCTCAATGTCGGCATTTACCCGTTCACCTCCATATTCCTCATTGTCTATTGTTTTCTTCCTGCTCTTTCCCTCTTCTCTGGCCAATTCATTGTCCAGACCCTCAATGTCACATTCCTTGCTTATCTCTTGACCATCACTGTGACATTATGCATGCTTGCTGTCCTTGAGATTAAGTGGTCTGGTATCGAGCTTGAAGAATGGTGGAGAAATGAGCAATTTTGGTTGATCGGAGGCACTAGTGCCCATCTTGCTGCTGTGCTCCAAGGTTTGCTGAAAGTCATAGCAGGGATTGAAATCTCCTTCACATTGACCTCAAAATCTGCAGGTGATGATGTTGATGATGAGTTTGCTGATCTCTACATTGTCAGATGGACATCCCTGATGATCCCACCAATCACAATCATGATGGTCAACTTAATAGCCATTGCTGTCGGGGTTAGCCGAACCATATACAGTGTCATACCGCAGTGGAGCCGCCTCCTCGGTGGCGTTTTCTTCAGTTTCTGGGTCTTAGCTCACTTGTATCCATTTGCAAAAGGTCTGATGGGAAGAAGAGGAAGGACACCAACCATTGTTTTTGTATGGTCAGGGCTGATAGCAATCACTATATCTCTCCTCTGGGTGGCCATCAATCCTCCTGCTGGTTCTACCCAAATTGGTGGATCATTTCAGTTTCCATGA 3432 0.4508 MASRSFKASRSSLSTSSDVPDGQKPPLPPTVTFGRRTSSGRYISYSRDDLDSELGSSDFMNYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDSKVMSDERGVDILPCECDFKICRDCYIDAVKTGGGMCPGCKEPYKNTDLDEVAVDNARPLPLPPPGGMSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGGLGNGKEDDVTDPTEFMNRPWRPLTRKLKIPAAILSPYRLLILIRMAVLALFLAWRVKHPNTDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPINRATDLNVLKEKFEAPTLNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHDIEPRNPESYFNLKRDPYKDKVRPDFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKLQRQHREDEPVESVKIPKATWMADGTHWPGTWLNSAPEHSRGDHAGIIQVMLKPPSDDPLLGSADDSKLIDLTDVDMRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRAKENHPGCCSCCFGRRKKHASMANSNEENRALRMGDSDDEEMDLSTFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGNRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSKMKLLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLAYLLTITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDVDDEFADLYIVRWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSTQIGGSFQFP 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1612 1143 MobiDBLite consensus disorder prediction 1 21 - -
Prci6g1612 1143 FunFam Cellulose synthase-like protein D3 110 192 - -
Prci6g1612 1143 SUPERFAMILY RING/U-box 116 182 - -
Prci6g1612 1143 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Prci6g1612 1143 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 575 714 IPR029044 -
Prci6g1612 1143 MobiDBLite consensus disorder prediction 1 38 - -
Prci6g1612 1143 Pfam Cellulose synthase 373 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci6g1612 1143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Prci6g1612 1143 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 272 1119 - -
Prci6g1612 1143 FunFam cellulose synthase-like protein D3 578 715 - -
Prci6g1612 1143 SUPERFAMILY Nucleotide-diphospho-sugar transferases 388 937 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1612 Prci-Chr6 13067997 13073523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1612 1 1143 Glycosyltransferase AT3G03050 84.709 0.0 2038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1612 K20924 - gmx:100792604 2221.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1612 6 13067997 13073523 Prci6g1612 6 13067997 13073523 ECH