Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1608 ATGAGTGACAATTTGATGGATAAAGTCAGCGCCTTGGGGGAGCGCCTGAAAATTGGTGGGTCTGAGGTGGGTCGAAGGATGAGCGAAGGCATGAGTTCTGTGAGCTTCAAGATGAGGGAATTTTTTCAGGGTCCAAGCGAGACTGATAAGCTTGTTGAGGATGCCACCTCTGAGGCCCTTGATGAGCCCGATTGGGCTATGAATCTTGAGCTTTGCGATTCGATCAATCATGAGCAGGTCAACAGTGTGGAATTGATTCGTTCAATCAAGAGACGGATCGCAATTAAAAGTCCTAAGGTTCAGTACCTGGCATTGGTTTTGCTTGAAACATGCGTTAAAAATTGTGAGAGGGCCTTCTCAGAAGTGGCAGCGGAGAGAGTCCTTGATGAGATGGTCAGGCTGATTGATGATCCTCAGACTGTTGTGAATAACCGGAACAAGGCCCTAACACTCATTGAGGCATGGGGAGAGTCAACCAGTGAGCTTCGTTATTTGCCGGTATATGAAGAGACGTACAAGAGTTTGAAGTCAAGAGGTATTCGATTCCCAGGTCGTGATGATGAGAGTTTGGCCCCTATTTTTACTCCTCCTCGTTCAGTAACTGCTTCAGAAGTTCATGTCGATCATCCAGTACATGTTCAGCATGATATTCCTAGGCAGAGTTTTACACCTGAGCAAACAAAGGAGGTTTTCAATGTTGCAAGAAATAGCATTGAACTTCTTTCTACTGTTTTGTCTTCATCACCTCAACAGGATGTTCTACAGGATGATTTGACAGCAACTCTTGTACAACAGTGTCGTCAGTCTCAATATATCGTACAGAGAATTGTGGAGACTGCTGGAGATGACGAGGCACTTCTTTTTGAGGCCTTGAATGTTAATGATGACATCCAGAAGGTTCTCACCAAGTATGAAGAGTTGAATAAGCCTGCTGCTGCTGCTCCTCCTCTTAGGCAGGAACCTGCTATGATACCGGTCGCCATTGAGCCAGACGAGTCACCTCTTAATACTCAAGAAGATGCATTGGTTAGAAAACCAGCTAGCTCGAAAGTTGGTCATGGAGGCAACAATGATGATATGATGGATGATCTTGATGAGATGATATTTGGCAAGAAGGGTGGGGATGCATCATCAAATGGAGGGCAAGATCCAAAGAAGCAGCAGTCATCAAAAGATGATGATCTCATTTCATTCTAA 1197 0.4486 MSDNLMDKVSALGERLKIGGSEVGRRMSEGMSSVSFKMREFFQGPSETDKLVEDATSEALDEPDWAMNLELCDSINHEQVNSVELIRSIKRRIAIKSPKVQYLALVLLETCVKNCERAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALTLIEAWGESTSELRYLPVYEETYKSLKSRGIRFPGRDDESLAPIFTPPRSVTASEVHVDHPVHVQHDIPRQSFTPEQTKEVFNVARNSIELLSTVLSSSPQQDVLQDDLTATLVQQCRQSQYIVQRIVETAGDDEALLFEALNVNDDIQKVLTKYEELNKPAAAAPPLRQEPAMIPVAIEPDESPLNTQEDALVRKPASSKVGHGGNNDDMMDDLDEMIFGKKGGDASSNGGQDPKKQQSSKDDDLISF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1608 398 Gene3D - 43 200 IPR008942 -
Prci6g1608 398 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Prci6g1608 398 FunFam TOM1-like protein 2 41 200 - -
Prci6g1608 398 CDD GAT_GGA-like_plant 230 307 - -
Prci6g1608 398 MobiDBLite consensus disorder prediction 335 398 - -
Prci6g1608 398 PANTHER TOM1-LIKE PROTEIN 1 1 397 IPR044836 GO:0035091|GO:0043130|GO:0043328
Prci6g1608 398 MobiDBLite consensus disorder prediction 356 370 - -
Prci6g1608 398 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Prci6g1608 398 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Prci6g1608 398 Gene3D - 213 310 IPR038425 -
Prci6g1608 398 PIRSF TOM1 32 397 IPR014645 -
Prci6g1608 398 SUPERFAMILY GAT-like domain 181 309 - -
Prci6g1608 398 Pfam VHS domain 46 179 IPR002014 GO:0035091|GO:0043130
Prci6g1608 398 SUPERFAMILY ENTH/VHS domain 41 183 IPR008942 -
Prci6g1608 398 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Prci6g1608 398 CDD VHS 49 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1608 Prci-Chr6 12983099 12988179 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1608 - - zju:107414831 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1608 6 12983099 12988179 Prci6g1608 6 12983099 12988179 ECH