Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1538 ATGTCCCTCTCGATTCCTACTTCTTCGCCCCATCACATTTCCAGCTTTCTCCACTCTCCAATCCCACCTTTCTCGTTATACCCTTCTTTTCTATATTATTATCCTCCTCAATTCCCACATGGCCATAGTACCAGCTTCGTTATTTGCCATTACAGAGTCAGTGAAAAATCAAATCTTGCTTCTAAAGCTTCCATGAAGATTAAACGAGGTGGGGTTTTCAGGTGTTATTCTTCCACGTTTGGAGGTAGTGAATGTGATAATGGGAGTGAAAGGGAGGACGATGATGATGATGAAGATGAAGAGAGGGCCAGTGGTGAGGATGAAGAAGAGAGGGCTTTTGGGTCCTTTCTTTTGCCTGAAAGATGGGATGTTTTGGGTCTTGGTCAAGCCATGGTTGACTTTTCTGGGACAGTTGATGATGAGTTCCTGAAGAAATTGGGGTTAGAGAAGGGAACACGGAAGGTAGTAAACCATGAAGAACGGGGTAGAATTTTGCAGGCTATGGATGGTTGCAGCTACAAAGCAGCTGCAGGTGGTTCTCTTTCTAATAGCTTAGTTGCCTTGGCAAGGCTCGGCAGTCGCCCCATTGGAGGTCCTATCATAAATGTGGCAATGGCTGGCAGTGTAGGGAATGATCCATTGGGTGGCTTCTACCGGGAAAAGTTACGTCGAGCAAATGTGCAGTTTCTTTCTGCACCTATCACAGGTGGGACAACTGGAACAGTTATAGTTCTCACAACTCCAGATGCTCAGCGTACAATGCTTGCATATCAGGGCACATCTTCAACCGTTAATTATGACACAACCTTGGCTAACGTAATTCCCAAGACCAACATACTTGTAGTTGAAGGGTACCTATTTGAACTTCCTGATACTATTAGAACAATAACAAAAGCTTGTGAGGAAGCTCACAGGAGTGGTGCTTTGGTTGCAATAACAGCTTCAGACATCTCTTGTATTGAGAGACACTTTGATGATTTCTGGGAAATCATCGAGAACTACGCCGACATCATCTTTGCAAACAGCGATGAAGCCAGAGCGCTCTGCAATCTCGATGCGAACGAGAGCATTGCTTCAGCTACGAGGTGCCTGAGTTTCTTTGTTCCCTTAGTATCAGTCACAGATGGCCATAGAGGCTCATACATAGGCATGAAAGGAGAAACTGTATATATCCCTCCTTCTCCCTGCATTCCAGTAGACACTTGTGGTGCAGGAGATGCATATGCTTCTGGCATCATGTATGGAGTTCTGAGAGGGATATCAGATGTGAAAAGAATAGGGAAAATAGCAGCCAATGTTGCAGCCACTGTTGTTGGCCAACAAGGAACAAGACTTGGGGTTTCAGATGCAGTCAAGTTGGCTGAATCTGTTGCATACCAACTTGAAACCAATGGTTTCCCATCAGATATTGGCACTGATCATATTTCCAGCTTCTAG 1437 0.4489 MSLSIPTSSPHHISSFLHSPIPPFSLYPSFLYYYPPQFPHGHSTSFVICHYRVSEKSNLASKASMKIKRGGVFRCYSSTFGGSECDNGSEREDDDDDEDEERASGEDEEERAFGSFLLPERWDVLGLGQAMVDFSGTVDDEFLKKLGLEKGTRKVVNHEERGRILQAMDGCSYKAAAGGSLSNSLVALARLGSRPIGGPIINVAMAGSVGNDPLGGFYREKLRRANVQFLSAPITGGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDTTLANVIPKTNILVVEGYLFELPDTIRTITKACEEAHRSGALVAITASDISCIERHFDDFWEIIENYADIIFANSDEARALCNLDANESIASATRCLSFFVPLVSVTDGHRGSYIGMKGETVYIPPSPCIPVDTCGAGDAYASGIMYGVLRGISDVKRIGKIAANVAATVVGQQGTRLGVSDAVKLAESVAYQLETNGFPSDIGTDHISSF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1538 478 MobiDBLite consensus disorder prediction 88 106 - -
Prci6g1538 478 Gene3D - 119 450 IPR029056 -
Prci6g1538 478 PANTHER SUGAR KINASE 119 456 - -
Prci6g1538 478 FunFam Putative sugar kinase slr0537 125 449 - -
Prci6g1538 478 MobiDBLite consensus disorder prediction 84 111 - -
Prci6g1538 478 PRINTS Ribokinase signature 173 192 IPR002139 GO:0016301
Prci6g1538 478 PRINTS Ribokinase signature 330 345 IPR002139 GO:0016301
Prci6g1538 478 PRINTS Ribokinase signature 371 382 IPR002139 GO:0016301
Prci6g1538 478 SUPERFAMILY Ribokinase-like 122 446 IPR029056 -
Prci6g1538 478 CDD adenosine_kinase 121 446 - -
Prci6g1538 478 Pfam pfkB family carbohydrate kinase 173 446 IPR011611 -
Prci6g1538 478 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 400 413 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1538 Prci-Chr6 12227338 12234028 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1538 - - qsa:O6P43_001736 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1538 6 12227338 12234028 Prci6g1538 6 12227338 12234028 ECH