Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1498 ATGGCCGCATTGAAGCTCTCACTGCTGTTAAGCTTCATCCTCGCATCGGTTTCAATTCGCGAAGGTTCCTCCACATGCAAGCGTATCGAGTGCCCTTCCTACGATTTGATTCATGTCGGCGACGGCTTCGAAATCCGCCGCTATAATTCCACTGTCTGGGCCTCCACCTCCTCCATTCAAGACATTTCTCTTGTTGAAGCAACCAGAACTGGATTCTTAAGGCTATTTGATTATATTCAGGGCAAGAACAACTACAAGCAAAAGATTGAGATGACAGGGCCTGTGATCACTGAAATATCACCTAGTGATGGACCTTTCTGTGAATCCTCATTTGTGGTAAGCTTCTATGTGCCAAAGAAGAACCAAGCAAACCCTCCATCAGCAACAGGTCTCCATGTCCAAAGATGGAAGCCTGTGTATGTAGCAGTAAGGCAGTTCAGTGGTTTTGTGAGAGATTCAAATGTTGGGGAAGAAGCTGCTGCCTTGAAGGCCAGTATTGCAGGCACTGAGTGGTCTTCTGCCATTGAAAGGAGTCACAGAGCCGGGCATGCTTCTGTTTATATTGTTGCTCAGTACAATGCCCCTTTTGAGTATGATGATAGGGTGAATGAGATATGGTTCTTGTTTGATTTGGAGAATGGAAGGAATTCTATCTGA 657 0.4566 MAALKLSLLLSFILASVSSXREGSSTCKRIECPSYDLIHVGDGFEIRRYNSTVWASTSSIQDISLVEATRTGFLRLFDYIQGKNNYKQKIEMTGPVITEISPSDGPFCESSFVVSFYVPKKNQANPPSATGLHVQRWKPVYVAVRQFSGFVRDSNVGEEAAALKASIAGTEWSSAIERSHRAGHASVYIVAQYNAPFEYDDRVNEIWFLFDLENGRNSI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1498 219 Pfam SOUL heme-binding protein 30 208 IPR006917 -
Prci6g1498 219 PANTHER HEME-BINDING PROTEIN-RELATED 21 210 IPR006917 -
Prci6g1498 219 FunFam Heme-binding protein 2 30 217 - -
Prci6g1498 219 SUPERFAMILY Probable bacterial effector-binding domain 25 210 IPR011256 -
Prci6g1498 219 Gene3D Regulatory factor, effector binding domain 29 218 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1498 Prci-Chr6 11670948 11672795 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1498 - - gmx:100305993 331.643