Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1329 ATGGCGAGCCGACCGTTAGAGAAGATGGCATCCATTGATGCACAGCTTCGTCAATTGGTTCCAGCAAAAGTGAGTGAGGATGATAAGCTCGTTGAGTACGATGCTTTGCTTTTGGATAGATTCCTCCATATTCTCAATGATTTACATGGCCAACGTCTCACTCAAACGGTAAAAGAAGCGTATGAGCTTTCAGCAGAATACGAAGGAAAGCATGAGCCACAAAAACTAGAGGAGCTTGGAAAATTGGTGACAAGTTTGGATGCTGGCGACTCTATTGTGGTGGCCAAATCATTGTCCAACATGCTTAATCTAGCTAACTTGGCGGAGGAAGTCCAGATTGCTCACCGGCGAAGGAACAAGCTCAAGAAGGGCAATTTCTCTGATGAGAACAATGCCACCACTGAATCTAACATCGAAGAGACTTTTCGGAGACTTGTCATCGAAATAAAGAAGTCGCCTGAAGAAATCTTTCACGAGCTCAAAAACCAGACTGTTGATCTCGTTCTCATTGCTCATCCCACTCAATCTGTTCGTAGATCTTTACTTCAAAAATACGCTAGGATAAGGAATTGCTTAACTCAATTTTACGCAGCAGATGCTCCTGATGATAAGCACGAGCTTGATGAAGCCTTACAGAGGGAGATTCAAGCTGCGTTCAGAACAGATGAAATAAGGAGGACGCCTCCAACACCACAAGATGAGATGAGAGCAGGAATGAGCTACTTTTATGAGACAATCTGGATGGGTGTTCCTAGTTTTCTGCGAAGAGTTGATACAGCTTTGAACAACATTGGCATTAACCAGCGTGTTCCTTATGACGCTCCTCTTATTCAGTTCTCGTCTTGGATGGGTGGTGATCGTGATGGCAATCCAAGGGTTACTCCTGAAGTGACTAGAGATGTTTGCTTATTGGCTAGAATGATGGCTGCAAATTTGTATTATTCCCAAATAGAGGATCTTATGTTTTAGCTGTCAATGTGGCGCTGCAACGAGGAGCTGCGTTTTCGTGCACATGAAATTCACAGATCTGCCAAGAATGATGATGTTGCAAAACACTATAAAGAGTTCTGGAAAAGAGTTCCCCTAAATGAACCATATCGTGTGATACTTGGCAACGTAAGGGACAGACTTTATCATACCCGTGAGCGTTCTCGCCATTTGCTTGCTCAAGGCCACTCTGACATTCCAGAGGAATTAGCTTTCACCGCAGTTCAGGAGTTCATGCAACCTCTGGAACTCTGTTACAGATCACTATGTGATTGTGGTGATAGAGCTATAGCAGATGGGAGTCTTCTTGATTTCCTGAGGCAGATCTCCACCTTTGGACTGTCAATGGTGAGGCTTGATATCAGACAAGAATCTGATCGTCACAGTGATGTTATGGACGCCATTACTAAACACCTTGGAATCGGATCCTACCATGAATGGTCCGAAGAAAAAAGACAAGAATGGCTTCTATCAGAGTTAAGTGGCAAGCGTCCATTGCTGGGACCAGACCTTCCTCAAACCGAAGAAGTTAAGGATGTTGTGGACACATTTCATGTCCTAGCAGAGCTACCTCCAGGAAGCTTCGGCGCCTACATCATATCCATGGCCACCGCGCCGTCCGACGTCCTCGAGGTGGAGCTTCTGCTGAAAGAATTCCACGTGAAGCATCCATTAAGAGTCGTCCCGTTGTTCGAAAAGCTTGCAGATTGGGAAGCTGCTCCGGCAGCACTAGCTCGCTTGTTCTCGTTAGACTGGTACAGAAACCGAATCAAGGGGAAGCAAGAAGTCATGATCGGATATTCAGATTCCGGCAAAGACGCCGGAAGGTTTACTGCAGCGTGGCAGCTATATAAGGCTCAAGAAGAACTTATAAAGGTGGCGAAGCAATATGGGATCAAGCTGACTATGTTCCACGGCCGTGGAGGCACCGTCGGGCGTGGCGGTGGGCCGACGCATCTGGCTATATTGTCTCAGCCACCGGACACGATTCATGGGTCGCTTCGCGTGACGGTGCAGGGAGAAGTTATAGAGCAATCGTTCGGAGAGCAGAATTTGTGCTTTAGAACGCTTCAGCGTTACACGGCGGCTACGTTAGAACACGGAATGCGTCCTCCGATTTCCCCAAAACCTGAATGGCGAGCTCTGATGGATCAGATGGCCGCCATTGCGGCTGAGGAATACCGTTCTATTGTGTTCAAAGAAAAGGGTTTCGTTGAGTATTTTCGCCTGGCAACACCAGAGTTGGAGTATGGAAGAATGAACATAGGAAGCAGACCGGCAAAGAGAAAGCCAAGTGGGGGAATAGAATCACTGAGGGCGATCCCATGGATCTTTGCGTGGACTCAAACAAGGTTTCATCTGCCAGTGTGGCTGGGCTTTGGGGAGGCATTCAAGCAAGTGATAGGCAAAGACATAAGGAATCTGAAGATGCTGCAAGAGATGTACAATCAATGGCCTTTCTTCAGAGTCACCATTGATTTGGTTGAGATGGTATTCGCCAAGGGAGATCCTGGCATCGCTGCTCTCTATGATAAGCTTCTTGTCTCTCCTGAACTCTGGCCTTTTGGTGACCAGTTGAGGGCCAAGTATGAAGATACCAAGAAACTCCTCCTTCAGGTGGCTGGACACAAGGAAATCTTAGAAGGAGATCCATACTTGAAGCAAAGATTGAGATTGCGAGATTCATACATTACAACCCTTAATGTTTGCCAAGCTTACACATTGAAAAGAGTGAGAGACCCAAACTATACAAAGAAGGAGCGTCCTCGGATCTCAAAAGACTCAACAGATCAGGTTAGTAAAGCTGCAGATGAGCTTGTTGCACTGAACCCTACAAGTGAATTTGCTCCTGGTATGGAAGATACCCTTATTCTCACTATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA 2904 0.4642 MASRPLEKMASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLHILNDLHGQRLTQTVKEAYELSAEYEGKHEPQKLEELGKLVTSLDAGDSIVVAKSLSNMLNLANLAEEVQIAHRRRNKLKKGNFSDENNATTESNIEETFRRLVIEIKKSPEEIFHELKNQTVDLVLIAHPTQSVRRSLLQKYARIRNCLTQFYAADAPDDKHELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFYETIWMGVPSFLRRVDTALNNIGINQRVPYDAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFXLSMWRCNEELRFRAHEIHRSAKNDDVAKHYKEFWKRVPLNEPYRVILGNVRDRLYHTRERSRHLLAQGHSDIPEELAFTAVQEFMQPLELCYRSLCDCGDRAIADGSLLDFLRQISTFGLSMVRLDIRQESDRHSDVMDAITKHLGIGSYHEWSEEKRQEWLLSELSGKRPLLGPDLPQTEEVKDVVDTFHVLAELPPGSFGAYIISMATAPSDVLEVELLLKEFHVKHPLRVVPLFEKLADWEAAPAALARLFSLDWYRNRIKGKQEVMIGYSDSGKDAGRFTAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQNLCFRTLQRYTAATLEHGMRPPISPKPEWRALMDQMAAIAAEEYRSIVFKEKGFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKQVIGKDIRNLKMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSPELWPFGDQLRAKYEDTKKLLLQVAGHKEILEGDPYLKQRLRLRDSYITTLNVCQAYTLKRVRDPNYTKKERPRISKDSTDQVSKAADELVALNPTSEFAPGMEDTLILTMKGIAAGMQNTG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1329 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 6 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 FunFam Phosphoenolpyruvate carboxylase 1 307 444 - -
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 279 294 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 219 235 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Prci6g1329 967 Coils Coil 104 124 - -
Prci6g1329 967 Gene3D Phosphoenolpyruvate/pyruvate domain 307 444 - -
Prci6g1329 967 Pfam Phosphoenolpyruvate carboxylase 36 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Prci6g1329 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 967 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1329 Prci-Chr6 9661909 9678800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1329 K01595 - gmx:100820574 1649.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1798 7 32976712 32982484 Prci6g1329 6 9661909 9678800 CCT
Prci6g1329 6 9661909 9678800 Prci7g2062 7 34663005 34668229 CCT