Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1064 ATGCGTGCCCCCAACGCTAGAAACCTTTGTACACTGAGTGGCCTTTTCCGTTCTTCAACCTCGAAACTCAAGAATTCTAAGCCACAATCCTATCCTCCAGCTTCATCCATTCATGAAGATGATTTTTCGGAGCTCGATGGTGATTCTCACTCGATCCGCAACGATCTTGAGTTTGAGCGACCCTCTGATTCAGAGAATTTGCCTGACCTGGTATCTAAGCATATTTCTTCTATGTTATCTGAGAATTCACCTAATTCGGTGTCTAAGAAGATTCCTTCCATGCTGTGTGAATCTGATGGAGCGGAGAAAAAGCTTTCAAGAGGTCAAATTCGCTGCCCTTCAATAATGGAATCTTCTCCTCAAGCCTCGTCCATTTTGGAAGATGATTTTTCAGAACTTGACAGCGAATATAATCCTTCAATCTCTGAAGACATTGACTTTTTGCAACCCTCTGTTTTAGATAATTCACCTAAGCTCCACACTGAGCAGATTAATGATATACTGTGCGGTGACTATGGTCAATTGGTCAAGAGATCAGGTGATGATGCGGAAAAATTGGAAATTTCACTAGATGTACCATGCTTTCTTGGTCAATTTGGTGGGAATTTATCGCAGCAACAGAAAGAGAAGGCTCGTGACAGAAAGCAAAAGTGGATTTTTAAACACATGCAGGAAAACCGATTTGACAGGGTACTTCAATTCTTTGCAGATAAAATGGGGGCAAAGGCTACTGTGGAAGTGTTAGGTAAATTGGGAAGAGAAACAGGCATGAAGGAATACAATGCATTAATAGAAGTATGCATAAAAAATGCCAGGAAAACTAATGATGAAGAAGTGGCAATTGAAGAAATGAGCAAGGCTTTTCGCCTTTTTAAACAAATGAGAGAACAAGGTTTTGAACTACGAGAGCAAACGTACAGCCCTCTTCTTGTGTATTTAATTGACATGGGTATGGTTGAAGAATTTCAATTTTTCAGTGAGGTAATCAAAGACGAAAATCCCGTTTCAGTTTCAAGATTGGGTTACTATGAAATGATGTTATGGCTGAGAGTTGGTAACAGAGAAAAGATTCAGGATCTTTGTAACTCTATAGCAGTCAATGATGGTATAGACTCTTCTGGTTTAGGAGAAAGTTATTTATTGGCATTTTGTGAAAGTGATTGGAAGGAGGGGCTTTTACAGCTGTTGGAAATTATAGACATAACAAAGCTTTCATCTACAGAATCTATAGCAGGCATTTTTAAATCATTGGGAAGGCTATGCTTGGAATCATATGCGGAAAGATTCCTTTTAGCTTTCAAATTTTGTGATGATGAAGCAAATAATGTTACAAACTTCATCGCCAGTTATGCTGTTAGCCTACCAAATTTAGCGGTTGAGGATGTCATCTTGAAATTCAAGGATTTGCACCAAGAACTGGAAGTTTCACCTGCATCCTCATCATACGAGAAGCTCGTTATGTATGCCTGTGACTTACTTGAGGTGCATTTAGCTCTTAAGATTGTTCGTGAAATGTGTGAAGCAGGCTTTGCCTTATCTACCGAGGTGTTAAATTCCGTATTACGAAGTGTTGAAGAAACATGTGAATATAATTTGGTCCACTGGATCTATTCCACAATATCTCACTACAGTTTGAAGGCAAATTCTGAAACATTCAGGTGTATGATAAGCTTGTGCACCAGGATGAAAGATTTTGAAAGTGCAGATAAGATGCTTAATGATTTGGAAGAAATGAATGTGAAGCCTACGTCTAGCATGTACAATGCTATTATTGCTGGATATTTTAGAGAGAAAAACATTAGTGATGCTTTAAGGGTCCTTGAGCGCATGAAAGATGCCAATATCAAGCCTGATTCTGGTACTTTCAACCATTTGATTAGCAACTCTAAAACTGAGGAGGATATAACCAAGTATTATGAAGAAATGCAGCAGTCTAACTGCCAACCTACAAAGCAGACTTTTGTGGCCCTTATAACTGCATATGCAACCTGTGGACAGTTGGAGAAGGCAAAACAGGTGGTCTTAGATCCAGCCGTTCCAGCAAAGAGCTTAAATGAAATCAAATGTGCCCTTCTCACGACTCTTGCATCGCATGGGCAATTTTCTGATTCTATTCATATTTATGAGGAAATCAAGGAATCTGGAAACAATCTGGAGCCAAAAGCTGTTATAAGTCTTATTGAGGGACACATCAAATCTGATGGGGAATTAGATAGATTGGTTCTGCTACTTGAAGAGTTGACTGATCCAGACTATTGGGTAGATGGTTGCTTCAGAATTATTATGTTTTGTGTTGAGAACAAGCATTTAAGTCTTGCTGTTGACCTGATCAAGCAACTCAATGATAAAATTCACGACAACGAACTACTCATGGAAGTTCTTTTGGATCAGGTATTTTCTACAATTGCATCTTCAGAGTCCGCACATTTGAAGTTTGGCCTAGACCTTTATTGGCGGATCAGGAAAGTGTTTGGCATTATACCTTCACGGCAATGTCTGGACTTTCTTCTAACTGCTTGTGCCAACGCCAAAGATTTGCGGAATATTCGTAAAATTTGGAAAGAATACCAGCTTGTTGGATACCCTTTTAATGTTTTAAGTTACGTGAGGATGTATCGAGCGCTTTTGGCTGCAGAAGATTTTCCATCTGCCAAATCTATACTCAATAAAATTCCAAGAGATGATCCCGATGTTTGTCGGGTCGTCAAAGAATGTCAAAAAGCATACGATGATCTTATTTCCTTGGATAAACTTGTGAAGAAAATGGATAAGAAAGAAAAGGAGGAAGATTTATTTGACTGA 2802 0.3897 MRAPNARNLCTLSGLFRSSTSKLKNSKPQSYPPASSIHEDDFSELDGDSHSIRNDLEFERPSDSENLPDLVSKHISSMLSENSPNSVSKKIPSMLCESDGAEKKLSRGQIRCPSIMESSPQASSILEDDFSELDSEYNPSISEDIDFLQPSVLDNSPKLHTEQINDILCGDYGQLVKRSGDDAEKLEISLDVPCFLGQFGGNLSQQQKEKARDRKQKWIFKHMQENRFDRVLQFFADKMGAKATVEVLGKLGRETGMKEYNALIEVCIKNARKTNDEEVAIEEMSKAFRLFKQMREQGFELREQTYSPLLVYLIDMGMVEEFQFFSEVIKDENPVSVSRLGYYEMMLWLRVGNREKIQDLCNSIAVNDGIDSSGLGESYLLAFCESDWKEGLLQLLEIIDITKLSSTESIAGIFKSLGRLCLESYAERFLLAFKFCDDEANNVTNFIASYAVSLPNLAVEDVILKFKDLHQELEVSPASSSYEKLVMYACDLLEVHLALKIVREMCEAGFALSTEVLNSVLRSVEETCEYNLVHWIYSTISHYSLKANSETFRCMISLCTRMKDFESADKMLNDLEEMNVKPTSSMYNAIIAGYFREKNISDALRVLERMKDANIKPDSGTFNHLISNSKTEEDITKYYEEMQQSNCQPTKQTFVALITAYATCGQLEKAKQVVLDPAVPAKSLNEIKCALLTTLASHGQFSDSIHIYEEIKESGNNLEPKAVISLIEGHIKSDGELDRLVLLLEELTDPDYWVDGCFRIIMFCVENKHLSLAVDLIKQLNDKIHDNELLMEVLLDQVFSTIASSESAHLKFGLDLYWRIRKVFGIIPSRQCLDFLLTACANAKDLRNIRKIWKEYQLVGYPFNVLSYVRMYRALLAAEDFPSAKSILNKIPRDDPDVCRVVKECQKAYDDLISLDKLVKKMDKKEKEEDLFD 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1064 933 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 548 582 IPR002885 -
Prci6g1064 933 Gene3D Tetratricopeptide repeat domain 757 930 IPR011990 GO:0005515
Prci6g1064 933 Pfam PPR repeat family 586 627 IPR002885 -
Prci6g1064 933 NCBIfam pentatricopeptide repeat 551 583 IPR002885 -
Prci6g1064 933 NCBIfam pentatricopeptide repeat 586 619 IPR002885 -
Prci6g1064 933 MobiDBLite consensus disorder prediction 20 49 - -
Prci6g1064 933 Coils Coil 777 797 - -
Prci6g1064 933 Coils Coil 915 933 - -
Prci6g1064 933 Gene3D Tetratricopeptide repeat domain 579 754 IPR011990 GO:0005515
Prci6g1064 933 Gene3D Tetratricopeptide repeat domain 217 362 IPR011990 GO:0005515
Prci6g1064 933 Gene3D Tetratricopeptide repeat domain 433 576 IPR011990 GO:0005515
Prci6g1064 933 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 583 617 IPR002885 -
Prci6g1064 933 PANTHER OS02G0132600 PROTEIN 104 925 - -
Prci6g1064 933 Pfam PPR repeat 551 580 IPR002885 -
Prci6g1064 933 Pfam PPR repeat 653 673 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1064 Prci-Chr6 7411827 7427441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1064 476 894 Glycosyltransferase AT1G05670 19.213 4.58e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1064 - - pcin:129313091 1647.48