Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1040 ATGGAGTCGATACTGGCGAGAGCGTTGGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCTAGAGATCAATTCAAGTTGCAGGGTCGGACGGTGCAGCTCTCGAATCTAGATTTAAACGGGGATGCTTTGCATTCAAGTGTTGGATTGCCACCTGCGCTGAATGTTGTGACGGCGAAAGTGGGGAAATTGGAGATCATGCTTCCTTCGGTGAGCAACGTTCAAATAGAACCCATCATTGTTCAAATTGATCGTCTTGATTTGGTTCTTGAGGAGAATGCTAATTTCGATGCATCTGCCAGTCCAAAGTGTACCATGGCATCTACTGCCTCCACAAAGGGTAGCGGATATGGTTTTGCCGATAAGATTGCAGATGGAATGACTATACAGATTCACACAGTTAACTTGTTACTTGAAACTCGTGGAGGTGTTGGCCGCCAAGGGGGATCAACTTGGGCACCACCTATGGCATCTATCACCATATGCAATCTTTTGCTCTATACCACAAATGAAGAATGGCAGGTTGTAAATCTTAAGGAAGCAAGGGAGTTCTCCAGCAACAAGAAGTATATTTACGTATTCAAAAAACTTGAATGGGAATCTTTGTCTATTGATCTTTTGCCACATCCTGACATGTTCACGGGTTCTACTTTAGGCCGCTCTCAAGAGGGAGCGAACCAGAGAGATGATGATGGTGCCAAGAGAGTTTTTTTTGGAGGCGAGCGATTCCTAGAAGGAATATCTGGAGAGGCATATATTACAATTCAGAGAACTGAATTAAACAGTCCACTTGGGCTTGAGGTTCAGTTACACATTACTGAAGCTGTGTGCCCAGCATTAAGTGAACCAGGACTACGTGCTCTTCTCCGCTTTATGACGGGTATTTATGTCTGCCTAAACCGAGGAGATGTTGATTTCAAGGCTCAACAGCTGTCCACAGAAGCAGCTGGGCGCTCTCTTGTCTCTATTGTTGTGGACCACATATTTTTTTGCATTAAAGATACTGAATTCAAGCTTGAGCTTTTGATGCAGTCTCTCTTCTTTTCTCGGGCTTGCATTTCTGATGATGATGATGACTATAACTTAACACGTATTACAATTTCTGGACTATTTCTGAGGGATACCTTCTCAAACCATCCATGTACCTTGGTGCAGCCGTCAATGCACACTTTGACAAGAGAAGCTCTCCATGTGCCAGAATTTGCTAGGAGCTTTTGTCCCCCTATATATCCATTAGGTGAACAGAAGTGGCAACTAATTGAAGGTACCCCTCTAATATGCCTTCATTCCCTACAGATCAAGCCTTCTCCCCTTCCACCAGCCTTTGCTTCTCAAACTGTTATCCACTGTCAGCCTCTGATGATTCATCTCCAAGAAGAATCCTGCTTGAGGATTTTTTCTTTCTTAGCTGATGGCATTGTTGTCAATCCTGGTGATGTTTTGCCAGATTTCTCAGTAAATTCTCTCATTTTCACACTTAAGGGACTAGATCTTACAATTCCTTTGGACGAGACCAAAATAAATATTCCTGAAAGCAACTTGGAGAGTTCAGTCCCGAGCTTCTTTTCTGGAGCAAGGCTTCATATTGAAAGCCTTTTGTTTTCAGATTCACCCTCTTTGAAACTAAGAATGCTGAACCTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGATCAACCAATTGATGCTAGCATCAAGAAGTGGACTGCTAGAGCATCACATCTTTCTTTGTCTCTTGAAACATGTAAAGGAGAAACTGGGTCTCAGAATTCTCTTGGATGGAGTGCAGGATTATGGAGATGTGTTGAACTGAAAGATGCTTGCATTGAAGTAGCTATGGCAATGGCTGATGGCACTCCATTGTTAGAAGTTCCTCCACCAGGGGGTATTGTAAGGGTTGGAGTTGCATGTGAACAATTTTTATCCAACACTTCTGTTGAACAGCTATATTTTGTTCTTTATCTCTATGCTTATTTTGGGAGCGTTGGTGAGAAAATTGCAAAAGCTGGGAAAAGTAAACGACTGATGGATGCCAGGGAGAAATATTCTAGTAGAAAGTTTATGGACAAGGTTCCCAGTGATACTGCTGTAAGTTTAGCAGTGAAAGACCTCCAACTTCGATTTCTGGGGTCTTCTTTAATGAATGTTGAGGAAATGCCTCTTGTGCAGTTTGTTGGAGATGATCTGTTCATTAGTGCCACTCATAGAACCCTTGGTGGTGCTGTTGTTGTTTCATCTGCTTTACGTTGGCAGAGTGTTAAGATCGATTGTGCAGATGCCGAACCTCACCTGGCACATGAAAACGGCTCAATTTTGAATTTTGTTGAGAGTATTCCCCCAATGAGTGGTAACGGATATCCTCAATTAAGAGCTGTATTTTGGATTAATAACAATAGGAACAATCTATCAAATGGAAATTCTCTCTCATTTCCTTTTCTGGATATACGCATGGAGCATGTCATTCCATTAAATGAACAAGACATGGAGTCTCATAGCTTGAATGTCTCTGCTTCTATTTCTGGTGTTCGCCTTGGGGGAGGAATGAATTATACAGAAGCCCTGCTGCATCGCTTTGGGATACTTGCACCTGATGGTAGCCCGGGATTGGGACTTTGCAAAGGACTAGAGAACTTACAATCAGGACCATTGTCAAAACTCTTTAAGACAGCACCTCTGGTCATTGATAATTCAGGAGATGATGGAAGTGCTATTGAAGGGAAAGAATCCAACTTTTTACAGTTGAAGAAGCCAGATGATGTGGATGTTGCTGTAGAATTGAGAGATTGGTTATTCGCTCTTGAAGGGGCTCAAGAGATGGCTGAAAGTTGGTGGTTCTCCGGCCATGAAGATGTAGGCAGAGTGGAGAGGTGTTGGCACACTACTTTCAACAGTCTACGAGTACATGCAAAAAGCAGCCCAAAGGATGTTTCTAATGGAAAAACTCAATTGAAAGGAATGCAACAATTTCCAGTACAGCTGATTACGGTTAGAGTTCAAGGACTGGAGATCTTCAAGCCCCATACAAGAAAGGACATTCCCTCGTCCATGTTAATTGCCAATGGGATTAAACAGCCCTCCGACACAGTTGGGGGAGCTGGTCTTGAAGTTCGCTTGGTACTATGTGAGGACAATGTTGATGATGAAATGACTAACTGGAAAGTGGAAAACGTAAAATTCTCTGTTCACCAACCGATTGAGGTGGTCGTAACGAAGGATGAGTTTCAGCACCTTGCTTTTCTGTGCAAATCTGAAATTGACTCAATGGGCCGGATAACAGCTGGGATTCTACGGCTCCTTAAGTTGGAAGGTTCTGTTGGCCAGTCTGCAATGGATCAATTAAGCAACCTAGGAACTGAAGGCATTGACAAGATTTTCTCTCGTGAAAAGCTCCAGAGAGATGGTAGCGCCCAATCTCCATCAACCCTCATCGGTGAAAGTCCACACAGATCAAAGAAACGAACATTAAATTTGCTGGAGGAAGCAGTCATGGATTCACAGGCGAAACTTAATGCTTTAATTGCTGAAGCTTCAGAGACTTCCACTCAGCACCTTCTTGTTGTGAACGAAGTCCGTCAAAAGATTGAGACTATGCAGAATCTATTGGTGCAGTTGCGGAATCAACTTTAG 3630 0.4303 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDLNGDALHSSVGLPPALNVVTAKVGKLEIMLPSVSNVQIEPIIVQIDRLDLVLEENANFDASASPKCTMASTASTKGSGYGFADKIADGMTIQIHTVNLLLETRGGVGRQGGSTWAPPMASITICNLLLYTTNEEWQVVNLKEAREFSSNKKYIYVFKKLEWESLSIDLLPHPDMFTGSTLGRSQEGANQRDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLEVQLHITEAVCPALSEPGLRALLRFMTGIYVCLNRGDVDFKAQQLSTEAAGRSLVSIVVDHIFFCIKDTEFKLELLMQSLFFSRACISDDDDDYNLTRITISGLFLRDTFSNHPCTLVQPSMHTLTREALHVPEFARSFCPPIYPLGEQKWQLIEGTPLICLHSLQIKPSPLPPAFASQTVIHCQPLMIHLQEESCLRIFSFLADGIVVNPGDVLPDFSVNSLIFTLKGLDLTIPLDETKINIPESNLESSVPSFFSGARLHIESLLFSDSPSLKLRMLNLEKDPACFCLWEDQPIDASIKKWTARASHLSLSLETCKGETGSQNSLGWSAGLWRCVELKDACIEVAMAMADGTPLLEVPPPGGIVRVGVACEQFLSNTSVEQLYFVLYLYAYFGSVGEKIAKAGKSKRLMDAREKYSSRKFMDKVPSDTAVSLAVKDLQLRFLGSSLMNVEEMPLVQFVGDDLFISATHRTLGGAVVVSSALRWQSVKIDCADAEPHLAHENGSILNFVESIPPMSGNGYPQLRAVFWINNNRNNLSNGNSLSFPFLDIRMEHVIPLNEQDMESHSLNVSASISGVRLGGGMNYTEALLHRFGILAPDGSPGLGLCKGLENLQSGPLSKLFKTAPLVIDNSGDDGSAIEGKESNFLQLKKPDDVDVAVELRDWLFALEGAQEMAESWWFSGHEDVGRVERCWHTTFNSLRVHAKSSPKDVSNGKTQLKGMQQFPVQLITVRVQGLEIFKPHTRKDIPSSMLIANGIKQPSDTVGGAGLEVRLVLCEDNVDDEMTNWKVENVKFSVHQPIEVVVTKDEFQHLAFLCKSEIDSMGRITAGILRLLKLEGSVGQSAMDQLSNLGTEGIDKIFSREKLQRDGSAQSPSTLIGESPHRSKKRTLNLLEEAVMDSQAKLNALIAEASETSTQHLLVVNEVRQKIETMQNLLVQLRNQL 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1040 1209 Coils Coil 1188 1208 - -
Prci6g1040 1209 Pfam N-terminal region of Chorein or VPS13 1 101 IPR026854 -
Prci6g1040 1209 MobiDBLite consensus disorder prediction 1131 1150 - -
Prci6g1040 1209 MobiDBLite consensus disorder prediction 1132 1146 - -
Prci6g1040 1209 PANTHER UNCHARACTERIZED 1 1207 IPR026728 -
Prci6g1040 1209 Coils Coil 1156 1176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1040 - - gmx:100811661 1796.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1040 6 7253224 7262107 Prci6g1040 6 7253224 7262107 ECH