Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1018 ATGCCAATGAGTCCCACATCGAAAGACACTGCGCAGATTTTCACCCTTCTATTTGGACCGATCATTTCCTTCAATTTGCCTCTCACTCTTCTGCACTCTTCTAACGAAGATGATGGTGAAACGGTGCAGCACATTGAAGCACTGAAAGAGGAAGTGAGGAAGATGCTTGTTCCTACCAATGAAAAGCCCTCCATTTCTAAAGTTGAATTGATTGATTCAATTCAACGCTTGGGTTTGGGACATCATTTTGAAAGTGAAATTGAACAAGTGTTGCAACAAACTCACCAGCACTACGTTCAAAATGGTCAACTCACTCTTGATGCAGACCTACGCCTCCTTGCTTTGCTTTTCAGATTATTGAGACAAGATGGATATCTCATTTCACCTGATGCGTTTAACAAGTTTAAAGATGAACAAGGAAACTTTAGTGAGAGAATTAGGAACGATGTGGAAGGAATGCTGAATTTGTACGAAGCTGCTCATCTGAGTATTCACGGAGAAGACACCTTAGACGAAGCAATCACTTTCACTTCCACTCAGCTTCAGGCTATCAGTAACACTGTTGAACCCAACACTTTTGTTGGTGAACAAGTCCATAATAGCTTAAGGCAATCTCTCCACAGGGGATTGCCACGGTTAGAGGCTCGAAAGTATATTTCAATATACCACTTATATCCTTCTTACAATGAAGTCTTGCTAACTTTAGCTAAATTAGATTTCAATACCCTTCAAAAGTCACATCAGAAAGAAGTTGCAGACATTTGCAAGTGGTGGAACAGCTTGGATGTGCCGAGAAGTCTATCATATGCGAGGGATAGGATAGTGGAAAGTTGCTTTTGGATTCTTGGAGTTTATTACGAGCCTCAATACTCTCTAGGCAGATTCATTCTCACCAAAGTGATGGCCGTTTTATCCCTCATTGATGATACTTATGATGCTTATGGAACTATCGATGAGTTAACGATCTTCACTGACGCACTTGAGAGGTTGGATATTTGCTGCCTCCATGATCTCCCAGAATACATGAAGCTAATTTACAAGGCACTGTTGAATGTTTATGATGAAATGGATCAAAACGTGAGGAAGGAAGGCAGAGAATACAGTCTTAACTATGCAAAATCTGAACTGAAGAAGGTGGTGCGAGCCTTCATGAGAGAGGCCGAATGGTTCAATGGAAACTATGTACCAACAACACAGGAGTATCTCGACACTGCAACAAGATCTTGTTCTTTTCAAATGCTCTCAACCATATCTTTCTTTGGGCTGGGACATATTGCCACTGAGGACATATTCAAATGGGTTACAAGTGGCCCAAAACTCGTAAAAGCTTGTTCAATCATTTGCAGGGCCATGGATGACATCGTCTCTAGCGAGTTTGAGCAAAAACGAGGGCACGTCGCTTCGGCCCTGGATTGCTACATGAAAGAACATGGTGTGTCAAGAGAAGAAGCCATTGATGAGTTCCGTAAGGTTACAAATAATGCGTGGAAGGATATGAATGAAGAATTCCTGAGACCTTTGGAAGTGGCGAGGCCTTGTATGATGCCAGTTCTGAACCTCGCTCGTGTGATGGACGTGCTTTACAAAGAAGAAGATAATTACACTCATGCTCAAGGAATCATGAAAGATTTCATTACAGCTTTACTGGTGGATCCTGTGCCAACATGA 1668 0.4191 MPMSPTSKDTAQIFTLLFGPIISFNLPLTLLHSSNEDDGETVQHIEALKEEVRKMLVPTNEKPSISKVELIDSIQRLGLGHHFESEIEQVLQQTHQHYVQNGQLTLDADLRLLALLFRLLRQDGYLISPDAFNKFKDEQGNFSERIRNDVEGMLNLYEAAHLSIHGEDTLDEAITFTSTQLQAISNTVEPNTFVGEQVHNSLRQSLHRGLPRLEARKYISIYHLYPSYNEVLLTLAKLDFNTLQKSHQKEVADICKWWNSLDVPRSLSYARDRIVESCFWILGVYYEPQYSLGRFILTKVMAVLSLIDDTYDAYGTIDELTIFTDALERLDICCLHDLPEYMKLIYKALLNVYDEMDQNVRKEGREYSLNYAKSELKKVVRAFMREAEWFNGNYVPTTQEYLDTATRSCSFQMLSTISFFGLGHIATEDIFKWVTSGPKLVKACSIICRAMDDIVSSEFEQKRGHVASALDCYMKEHGVSREEAIDEFRKVTNNAWKDMNEEFLRPLEVARPCMMPVLNLARVMDVLYKEEDNYTHAQGIMKDFITALLVDPVPT 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1018 555 FunFam Isoprene synthase, chloroplastic 62 228 - -
Prci6g1018 555 Pfam Terpene synthase family, metal binding domain 233 498 IPR005630 GO:0000287|GO:0010333|GO:0016829
Prci6g1018 555 SFLD Terpene Cyclase Like 1 C Terminal Domain 229 553 IPR034741 -
Prci6g1018 555 Pfam Terpene synthase, N-terminal domain 33 202 IPR001906 GO:0010333|GO:0016829
Prci6g1018 555 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 33 224 IPR008930 -
Prci6g1018 555 Gene3D Farnesyl Diphosphate Synthase 33 543 IPR008949 -
Prci6g1018 555 FunFam Isoprene synthase, chloroplastic 199 543 - -
Prci6g1018 555 PANTHER OS04G0344100 PROTEIN-RELATED 44 552 - -
Prci6g1018 555 SUPERFAMILY Terpenoid synthases 228 553 IPR008949 -
Prci6g1018 555 SFLD Isoprenoid Synthase Type I 229 553 - -
Prci6g1018 555 CDD Terpene_cyclase_plant_C1 18 552 IPR044814 GO:0010333|GO:0016102
Prci6g1018 555 Gene3D - 62 228 IPR036965 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1018 Prci-Chr6 7051119 7053914 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1018 K15803 - aprc:113865171 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1018 6 7051119 7053914 Prci6g1018 6 7051119 7053914 ECH