Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1017 ATGGCTTCTGTTGCTGCTTCAACATTAGTAATTGCTGTTCCTTCTTTAAAAAGACATGCCAATGAGTCCCACATCGAAAGACACTGCGCAGATTTTCACCCTTCTATTTGGACCGATCATTTCCTTCAATTTGCCTCTCACTCTTCTGAAGATGATGGTGAAACGGTGCAGCACATTGAAGCACTGAAAGAGGAAGTGAGGAAGATGCTTGTTCCTACCAATGAAAAGCCCTCCATTTCTAAAGTTGAATTGATTGATTCAATTCAACGCTTGGGTTTGGGACATCATTTTGAAAGTGAAATTGAACAAGTGTTGCAACAAACTCACCAGCACTACGTTCAAAATGGTCAACTCACTCTTGATGCAGACCTACGCCTCCTTGCTTTGCTTTTCAGATTATTGAGACAAGATGGATATCTCATTTCACCTGATGCGTTTAACAAGTTTAAAGATGAACAAGGAAACTTTAGTGAGAGAATTAGGAACGATGTGGAAGGAATGCTGAATTTGTACGAAGCTGCTCATCTGAGTATTCACGGAGAAGACACCTTAGACGAAGCAATCACTTTCACTTCCACTCAGCTTCAGGCTATCAGTAACACTGTTGAACCCAACACTTTTGTTGGTGAACAAGTCCATAATAGCTTAAGGCAATCTCTCCACAGGGGATTGCCACGGTTAGAGGCTCGAAAGTATATTTCAATATACCACTTATATCCTTCTTACAATGAAGTCTTGCTAACTTTAGCTAAATTAGATTTCAATACCCTTCAAAAGTCACATCAGAAAGAAGTTGCAGACATTTGCAAGTGGTGGAACAGCTTGGATGTGCCGAGAAGTCTATCATATGCGAGGGATAGGATAGTGGAAAGTTGCTTTTGGATTCTTGGAGTTTATTACGAGCCTCAATACTCTCTAGGCAGATTCATTCTCACCAAAGTGATGGCCGTTTTATCCCTCATTGATGATACTTATGATGCTTATGGAACTATCGATGAGTTAACGATCTTCACTGACGCACTTGAGAGGTTGGATATTTGCTGCCTCCATGATCTCCCAGAATACATGAAGCTAATTTACAAGGCACTGTTGAATGTTTATGATGAAATGGATCAAAACGTGAGGAAGGAAGGCAGAGAATACAGTCTTAACTATGCAAAATCTGAACTGAAGAAGGTGGTGCGAGCCTTCATGAGAGAGGCCGAATGGTTCAATGGAAACTATGTACCAACAACACAGGAGTATCTCGACACTGCAACAAGATCTTGTTCTTTTCAAATGCTCTCAACCATATCTTTCTTTGGGCTGGGACATATTGCCACTGAGGACATATTCAAATGGGTTACAAGTGGCCCAAAACTCGTAAAAGCTTGTTCAATCATTTGCAGGGCCATGGATGACATCGTCTCTAGCGAGTTTGAGCAAAAACGAGGGCACGTCGCTTCGGCCCTGGATTGCTACATGAAAGAACATGGTGTGTCAAGAGAAGAAGCCATTGATGAGTTCCGTAAGGTTACAAATAATGCGTGGAAGGATATGAATGAAGAATTCCTGAGACCTTTGGAAGTGGCGAGGCCTTGTATGATGCCAGTTCTGAACCTCGCTCGTGTGATGGACGTGCTTTACAAAGAAGAAGATAATTACACTCATGCTCAAGGAATCATGAAAGATTTCATTACAGCTTTACTGGTGGATCCTGTGCCAACATGA 1710 0.417 MASVAASTLVIAVPSLKRHANESHIERHCADFHPSIWTDHFLQFASHSSEDDGETVQHIEALKEEVRKMLVPTNEKPSISKVELIDSIQRLGLGHHFESEIEQVLQQTHQHYVQNGQLTLDADLRLLALLFRLLRQDGYLISPDAFNKFKDEQGNFSERIRNDVEGMLNLYEAAHLSIHGEDTLDEAITFTSTQLQAISNTVEPNTFVGEQVHNSLRQSLHRGLPRLEARKYISIYHLYPSYNEVLLTLAKLDFNTLQKSHQKEVADICKWWNSLDVPRSLSYARDRIVESCFWILGVYYEPQYSLGRFILTKVMAVLSLIDDTYDAYGTIDELTIFTDALERLDICCLHDLPEYMKLIYKALLNVYDEMDQNVRKEGREYSLNYAKSELKKVVRAFMREAEWFNGNYVPTTQEYLDTATRSCSFQMLSTISFFGLGHIATEDIFKWVTSGPKLVKACSIICRAMDDIVSSEFEQKRGHVASALDCYMKEHGVSREEAIDEFRKVTNNAWKDMNEEFLRPLEVARPCMMPVLNLARVMDVLYKEEDNYTHAQGIMKDFITALLVDPVPT 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1017 569 Pfam Terpene synthase family, metal binding domain 247 512 IPR005630 GO:0000287|GO:0010333|GO:0016829
Prci6g1017 569 SUPERFAMILY Terpenoid synthases 242 567 IPR008949 -
Prci6g1017 569 Pfam Terpene synthase, N-terminal domain 36 216 IPR001906 GO:0010333|GO:0016829
Prci6g1017 569 SFLD Isoprenoid Synthase Type I 243 567 - -
Prci6g1017 569 CDD Terpene_cyclase_plant_C1 27 566 IPR044814 GO:0010333|GO:0016102
Prci6g1017 569 Gene3D Farnesyl Diphosphate Synthase 34 557 IPR008949 -
Prci6g1017 569 Gene3D - 76 242 IPR036965 GO:0010333|GO:0016829
Prci6g1017 569 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 33 238 IPR008930 -
Prci6g1017 569 PANTHER OS04G0344100 PROTEIN-RELATED 26 566 - -
Prci6g1017 569 FunFam Isoprene synthase, chloroplastic 213 557 - -
Prci6g1017 569 FunFam Isoprene synthase, chloroplastic 76 242 - -
Prci6g1017 569 SFLD Terpene Cyclase Like 1 C Terminal Domain 243 567 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1017 Prci-Chr6 7051119 7053914 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1017 K15803 - aprc:113865171 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1017 6 7051119 7053914 Prci6g1017 6 7051119 7053914 ECH