Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1004 ATGGCGGCCCTGAAGCTGCTTCTCTCTCAAGCTCGCCGCCATTGCCTCACCAGCCGTCATTCACATTTCCACTCTTCCCTTTTTCTTGGGTCTCGGAGATCCCTTTGTTCTTCTTCTTCTGCATCTTCTTCTTCCTCACAACCCGATGAATCGGACTCAAAACCTCCACCTCCAAGGGGACCCTCTCCAACCATTTCAATCCAACCCGTTTCATACCCGGTTAAACCTAAAGACCCGTCACCTCCAGATACCACTGAATCCTCCGAAGCTCCATTGCAAAATCAATCGCCGGCGCCACCACCTCCTCGCCTTCCACGAGGACCGACATTGACGGAAGATACCGCGGAATCACGGCGGGCTTGGACAAGGGAAGATATTCGGTATGTAAAGGACGCGCCTTCGATATCGCCGGTTTCCTATCCTTTGCGAGTGGCGCCACTTCCTGAAGACAAGGCTACTGCTGGTGCTGAAGCAGGAAAGGATGATGGCACGAAGGCCAATGAAGAAATTGACAAGGAGAGTAGAAAAATTAGGGCGGATGACCAGTTAAAGAGGAGAGTTATTAGAGTTGCGGAAGAGGAGAAGGTGCGGGTTCCTTTTCCGACTCTGATGAAGGTGAAGCAAAAGGAGAAGCCGCCTATTTTTGATTTGACGGAGGCAATTCGCCAAGTTAAGGCTAATGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGACTGGCTATTGAATCAAAGCGAACAGAACTGGCAGTTCGTGGTACTATGATTCTGCCTCATGGTGCACCGAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGAGCTGATGCTGAGGAAGCTAGAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAATGGAAATAACAAGCTTAGAGTTGACAAGTGCTTCTCAACTCCAGGAATGGCACCTCATCTTGGAAAGATAGCACAATATCTTAGAAAGCGTAGACTGATGCCAGACAAGAAACTAGGTACTCTGACCAATGATATTCCTGGGCAGTTGAAAGAGCTAAGACAGGGTCGTGTGGAGTTTAAAATGGAGAGTAAATCAATTGTGCATGCAGGAATCGGAAAGCTTCAAAATATGCTGGGTATGTGCTATCTGTCCATATGTGCAGCACGATGGGCCCAGGATTCCCTGTTTCAATACAGTCCTTGTCAAGAGCAGCAGATAACTACAAGTCTCTGA 1233 0.4809 MAALKLLLSQARRHCLTSRHSHFHSSLFLGSRRSLCSSSSASSSSSQPDESDSKPPPPRGPSPTISIQPVSYPVKPKDPSPPDTTESSEAPLQNQSPAPPPPRLPRGPTLTEDTAESRRAWTREDIRYVKDAPSISPVSYPLRVAPLPEDKATAGAEAGKDDGTKANEEIDKESRKIRADDQLKRRVIRVAEEEKVRVPFPTLMKVKQKEKPPIFDLTEAIRQVKANAKAKFDETVEVHVRLAIESKRTELAVRGTMILPHGAPKAVSVAVFAEGADAEEARAAGADIVGGKELIEEIANGNNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTNDIPGQLKELRQGRVEFKMESKSIVHAGIGKLQNMLGMCYLSICAARWAQDSLFQYSPCQEQQITTSL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1004 410 CDD Ribosomal_L1 217 374 IPR028364 -
Prci6g1004 410 Gene3D - 270 353 IPR016095 -
Prci6g1004 410 SUPERFAMILY Ribosomal protein L1 207 374 IPR023674 -
Prci6g1004 410 Pfam Ribosomal protein L1p/L10e family 225 375 IPR028364 -
Prci6g1004 410 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 130 375 - -
Prci6g1004 410 MobiDBLite consensus disorder prediction 34 119 - -
Prci6g1004 410 Gene3D - 210 269 - -
Prci6g1004 410 MobiDBLite consensus disorder prediction 34 50 - -
Prci6g1004 410 FunFam 50S ribosomal protein L1 262 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1004 Prci-Chr6 6942809 6948744 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1004 - - lang:109351870 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1004 6 6942809 6948744 Prci6g1004 6 6942809 6948744 ECH