Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1001 ATGGCTTTGGTTGATATAACCAAATCCTGCATCGATTCCATCAGACAGATATCAGAGCATATTGATGGTGCTATTGTTTACTTAGATGCTGGGTGTACAGAGAGTTTCCAGTTTATTGATGCATATTCTGTGCTTTTGGATGTTGGAGCCCGAGCTATTTGCAGTTTAGAAAACATGTGTTCACTTGATGCGGTGGTTGATTGGAACTCATATTCTAATCCTGCGAGGAAACTTGTCATAATCACATCATGTTTGCTAAGTGATGCACATCGGTATATTTTACGATGCCTGAGCACACATCAAGTTGTTCGTCATTGCATTATATTTTCATCAATCTCAGAGACAGCTCATTCAACATTTCCTGATTCACCTCTGGGACCAGATGCATATCAAGAATATGAAGCCTTGCTGGTTCAAGATTATGAAGAACTAGTTAAGAAATCTGGGACAAATTCTAGTGGAAAGCTTAAAGATGAAGGACATTCACAGTCTCCTTCCAGTGGAAAGGATGCTTTTCATCTTGAAGCTAGTTCACGTGCAATTTTACGTGGAGATAATTCATTAGACTACATTGAAGATGGAGGGGCAAGATTGGTTGTTTCTGTTAATCATTTTCCTTTGATTTTATGTCCCCTTTCACCAAGAGTATTCGTTTTACCTTCAGAAGGGTTGGTAGCTGAAGCATGCCTATCAGCCGAACATGAAGACTCCATTAGTCCTGGTTTGCCTCCCATAAGCACTGGAATGCTCTCTGATGCTGATGACGTGCCTCCAGGGGCTACTCTTACTGCACACTTTCTCTACCACTTGGCATCAAAGATGGACTTGAAAATGGAGATTTTCTCCCTTGGTGATATGTCAAAAGTAGTTGGGAAGCTTCTGACAGACATGTCAAGTCTGTATGATGTAGGTCGCCGTAAACGATCAGCAGGGCTTTTACTCATTGATCGCACACTTGATCTTCTTACTCCTTGCTGCCATGGGGACTCATTGGTTGATTGTATTTTTTCATGTCTGCCCCGTAGGAGTAGAACTACTTCACATCCCCAAGTTAAGAGTTCAGGAACCCAGCTCAAACATGGCACTTCCTACCTGCAACGCGCGCCCTTAGATGTCCAGATACCACTTGGGAAGATCCTCAATGAAGAAGATTGCAAAATGGATAATTTTCGTCTACTAGAAAGCGTTGAAGCTTTTCTTTGTGGATGGAATTCTAGCTCATCTGATTCTCAGATGTCTGATTTAATTAGTTTTAGTCAGAGAATTTATGATAAGTCTCTAAATTCTGACGGAGAGATTCTGACTGGGTCCTTAATCTCCTCTGAAAATTTTCGTGGAACACCATTCTTGGAAGCTTTACTAGATAGAAGAACAAGAGATGGAGCCTTACTTGTAAAGAAATGGTTACAAGAAACACTGCGTAGGGATAATGTAACTTTGAATGTGAAATCTCGTCCTGGTCATGTTACCAGACAAGAATTGCAAGCTATGATCACAGCATTGGGCAGGAGCCAATCATCTTTAGTGAGAAACAAAGGAATCATTCAATTAGCTTCTGCCACCCTATTAACCCTTGAGGAATCAACTTCTGCCAAATGGGATGCATTTATCAGTGCCGAGAAGATTCTAAGCTCAAGTTCTGGAGAAACCAGTCAAAATCTTGCTGCTCAAATTGGCGATCTCATTAATAAGAGTGCTTTATTGGGATCACATAGAAATAAAATAAAGAAGGAGCTCTCACAGGGGGTATTTTCATTGCAAGATGCTTTGTTGTTGATGATTGTTGGATATATATGGGCTGGGGAGAATTTCCCAACATCTGGATCCGATGGACCATTCTCCTGGCAAGAGGAACATTTGTTAAAAGAGGCTGTTGTAGATGCCATTCTTGAAAATCCATCAGTAGCCAAACTCAAGTTTCTGGATGGACTAAGGGAAGAGCTTGAAGCTAATTTAAGCAAGTCAAAATCAGAAGAAACAACCAAGGAATCTCCAAAACTAAATATTGATGATTTTGATGATGATCAATGGGGCCATTGGGGTGATGAAGAAGCTGATGAAGATAACAAAAATGAGCTAGTGTATGATGACATGCAGCTGAAGTTGGAGTTGCGTGATAGGGTGGATCACCTTTTTAAATTCCTTCATAAGTTGTCTGGTTTGAAAAGAAAAAATATACCAATGAGGGATGGATCGTTGACCATGGAAACTAATTTTGTTGATGAGGCTTCCATGGGAAAAGGATTACTTTATAAGCTGCTAACAAGGGTGTTGGGCAAGTTTGATGTCCCAGGGTTAGAATACCATTCTTCCACAGTGGGGCGGCTTTTTAAGAGTGGATTTGGAAGATTTGGCCTTGGTCAGGCAAAGCCTAGTCTTGCTGATCAAAATGTCATTTTGGTGTTTGTGATTGGGGGCATCAATGGAGTTGAGGTACGTGAAGCTCATGAAGCCTTGTCTGAAAGCGGAAGACCTGATATTGAATTGCTTGTTGGTGGAACAACTCTGCTCACTCCTGATGACATGCTTGATTTACTATTGGGGGAGTCCAGTTACGTTAGATCCTTTCATCAATAG 2577 0.4102 MALVDITKSCIDSIRQISEHIDGAIVYLDAGCTESFQFIDAYSVLLDVGARAICSLENMCSLDAVVDWNSYSNPARKLVIITSCLLSDAHRYILRCLSTHQVVRHCIIFSSISETAHSTFPDSPLGPDAYQEYEALLVQDYEELVKKSGTNSSGKLKDEGHSQSPSSGKDAFHLEASSRAILRGDNSLDYIEDGGARLVVSVNHFPLILCPLSPRVFVLPSEGLVAEACLSAEHEDSISPGLPPISTGMLSDADDVPPGATLTAHFLYHLASKMDLKMEIFSLGDMSKVVGKLLTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLVDCIFSCLPRRSRTTSHPQVKSSGTQLKHGTSYLQRAPLDVQIPLGKILNEEDCKMDNFRLLESVEAFLCGWNSSSSDSQMSDLISFSQRIYDKSLNSDGEILTGSLISSENFRGTPFLEALLDRRTRDGALLVKKWLQETLRRDNVTLNVKSRPGHVTRQELQAMITALGRSQSSLVRNKGIIQLASATLLTLEESTSAKWDAFISAEKILSSSSGETSQNLAAQIGDLINKSALLGSHRNKIKKELSQGVFSLQDALLLMIVGYIWAGENFPTSGSDGPFSWQEEHLLKEAVVDAILENPSVAKLKFLDGLREELEANLSKSKSEETTKESPKLNIDDFDDDQWGHWGDEEADEDNKNELVYDDMQLKLELRDRVDHLFKFLHKLSGLKRKNIPMRDGSLTMETNFVDEASMGKGLLYKLLTRVLGKFDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGVEVREAHEALSESGRPDIELLVGGTTLLTPDDMLDLLLGESSYVRSFHQ 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1001 858 Coils Coil 638 658 - -
Prci6g1001 858 SUPERFAMILY Sec1/munc18-like (SM) proteins 186 328 IPR036045 -
Prci6g1001 858 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 846 IPR001619 GO:0016192
Prci6g1001 858 SUPERFAMILY Sec1/munc18-like (SM) proteins 485 848 IPR036045 -
Prci6g1001 858 Gene3D - 732 848 IPR027482 -
Prci6g1001 858 Pfam Sec1 family 490 844 IPR001619 GO:0016192
Prci6g1001 858 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1001 Prci-Chr6 6933933 6942108 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1001 - - gmx:100804041 1305.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1001 6 6933933 6942108 Prci6g1001 6 6933933 6942108 ECH