Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0984 ATGGCCGGGACCAACGCCACCGCCTTATCTCACCTTCCCGATGAGATCCTCGCCAACGTATTTGCTGCCGTCTCCGACACTCGCACCCGCAACGCCCTCTCCCTCGTCTGCCAGAGCTTCCGCCGTCTCGAGAGGAAGACCCGCACCTCCCTCACGCTCCGAGGCAACGCGCGTGACCTCCACCTCATCCCTGACTGTTTCAGCTACGTCACCGACCTCGACCTCTCTCTCCTCTCTCCTTGGGGCCACTGCCTCCTCGCCCACCGCCTGCGCGACGCTTTCCCTCGCGTTACTTCGCTCACCGTCTACGTCCGCTCTTCCGCCACGCTCCAGCTTCTGCTTCTCGATCCGTGGCCAGAATTGCGCCACGTCAAGCTCGTCCGTTGGCATCAAAGGCCAGCGTCGACGCCCGGGTCCGATTTCGCCGTATTGTTCGAGAAATGCAAATCACTGTGGTCTTTGGACCTGTCCAGCTTCTACCACTGGACCGAGGATCTCCCTCCTGTTCTGACGGCTAATCCGGTTACGGCTGCCTCGCTAAAGGGGCTGAACCTGCTGACGACGTCGTTTACTGATGGATACAGGTCTTATGAAATCCAGTCCGTCACTGCGGTTTGCCCTAACCTTGAGCACCTTCTGGTGGCTTGTGCCTTCGATCCAAGGTATCTTGGGTATGTTGGAGATGAGACTCTGTTAGCAATAGCTTCCAATTGCTCTAAGCTATCGCTTCTTCATCTTGCTGATACATCTTCATTGGCTAACCGGAGGGGTGATCCTCTCGACGAGGGGTATACTGCAGAGGATGCTAGGATTAGCCGTACAACACTAATTGAGTTGTTTTCTGGGCTCCCTTTGCTTGAAGAGCTGGTGCTAGATATTTGTAAGAATGTGAGAGACAGCAGCTTTGCCTTGGAAGTGCTGAATTCCAAATGCCCCAGGTTGAAGGTACTCAAGTTAGGCCAATTTCACGGGATTTGCTTAGCCATTGGGTCACAGCTCGATGGGATTGCCCTCTGCCAAGGACTTGAATCTTTGTCGATTAAGAATTGCGCAGACTTGACGGACATGGGTTTGATAGAGATTGCCAGGGGTTGCTCAAGATTGGTCAAGTTTGAAGTACAGGGATGCAAGCATATAACGGAAAAAGGGCTGAGGACGATGGCTTGCCTACTTCGCAAGACTCTGATCGATGTTAAGATTTCTTGCTGCTTGAATCTTGATACTGCTGCGTCTCTGAGAGCTTTGGAGCCAATTCGTGATCGGATCGAGCGGCTTCATGTGGATTGTGTGTGGAATGACTTGAAAGAAACTGATAGTCTGGGAAAAACCAACCTTAATTTCGGCCTTAACGGCTTTGATGAACCGTGTTCTTCAACCACTAAGGCTGCTGAAGAATTTGTGGATTATTTTGGGAGTAGTGCAGATATAGAAACAAGCAAGAGGAAGAGGCAGAGATGCAATTACTTAATGGAGGCCAATTGGAGCAACGGTAATGGTTATTGGTGCAACAGCTGGGACAGGTTGAAATACCTTTCCCTTTGGATAGGAGTTGGGGAGCTACTGACTCCATTGCCAGCGGCAGGGCTGGAAGATTGCCCCAACTTGGAAGAGATTCGCATTAGGGTTGAAGGAGATTGCCGAGACCGGCCAAAACTGTCTGAGCATGAATTCGGGCTGAGCATTCTCACATGCTATCCTCAGCTCATAAAGATGCAGTTAGATTGTGGGGAGACAAGGGGTTATGCTCTCACGGCACCTTCTGGGCAGGTGGATTTGAGCCTGTGGGAGAGGTTCTTCCTCAATGGTATTGGCACCTTGACTCTTCAGGAACTTGATTACTGGCCGCCACAAGATGAAGATGTGAACCAAAGGAGCCTATCTCTTCCAGCTGCTGGCTTGCTCCGAGAATGTGACACTCTAAGGAAACTCTTCATTCATGGAACAACCCATGAACATTTCATGAATTTCTTCCTCAAGATACGCAACCTGAGGGATGTGCAGCTGAGGGAGGATTATTATCCAGCACCAGAGAATGACATGAGTACAGAGATGAGAGTGGCTTCATGCAGCCGCTTTGAAGATGCTTTAAATAGTCGTCCATTCTATGATTGA 2112 0.5085 MAGTNATALSHLPDEILANVFAAVSDTRTRNALSLVCQSFRRLERKTRTSLTLRGNARDLHLIPDCFSYVTDLDLSLLSPWGHCLLAHRLRDAFPRVTSLTVYVRSSATLQLLLLDPWPELRHVKLVRWHQRPASTPGSDFAVLFEKCKSLWSLDLSSFYHWTEDLPPVLTANPVTAASLKGLNLLTTSFTDGYRSYEIQSVTAVCPNLEHLLVACAFDPRYLGYVGDETLLAIASNCSKLSLLHLADTSSLANRRGDPLDEGYTAEDARISRTTLIELFSGLPLLEELVLDICKNVRDSSFALEVLNSKCPRLKVLKLGQFHGICLAIGSQLDGIALCQGLESLSIKNCADLTDMGLIEIARGCSRLVKFEVQGCKHITEKGLRTMACLLRKTLIDVKISCCLNLDTAASLRALEPIRDRIERLHVDCVWNDLKETDSLGKTNLNFGLNGFDEPCSSTTKAAEEFVDYFGSSADIETSKRKRQRCNYLMEANWSNGNGYWCNSWDRLKYLSLWIGVGELLTPLPAAGLEDCPNLEEIRIRVEGDCRDRPKLSEHEFGLSILTCYPQLIKMQLDCGETRGYALTAPSGQVDLSLWERFFLNGIGTLTLQELDYWPPQDEDVNQRSLSLPAAGLLRECDTLRKLFIHGTTHEHFMNFFLKIRNLRDVQLREDYYPAPENDMSTEMRVASCSRFEDALNSRPFYD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0984 703 FunFam F-box/LRR-repeat protein 4 9 48 - -
Prci6g0984 703 Pfam F-box 11 49 IPR041567 -
Prci6g0984 703 SUPERFAMILY RNI-like 141 407 - -
Prci6g0984 703 CDD F-box_AtTIR1-like 9 48 - -
Prci6g0984 703 Gene3D Ribonuclease Inhibitor 11 444 IPR032675 -
Prci6g0984 703 SMART LRR_CC_2 206 237 IPR006553 -
Prci6g0984 703 SMART LRR_CC_2 365 390 IPR006553 -
Prci6g0984 703 SMART LRR_CC_2 339 364 IPR006553 -
Prci6g0984 703 SUPERFAMILY F-box domain 7 45 IPR036047 GO:0005515
Prci6g0984 703 PANTHER UNCHARACTERIZED 11 426 - -
Prci6g0984 703 ProSiteProfiles F-box domain profile. 6 53 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0984 Prci-Chr6 6830979 6833475 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0984 - - adu:107462359 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0984 6 6830979 6833475 Prci6g0984 6 6830979 6833475 ECH