Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0893 ATGCTTCTGTCAGAGAGATCTAAGTACCCGAATCAGAGCAAAAAGGGTGTCTGGGAATCTCTCCAATCTCCTAAATCTCGCTGGTCTTCGCCGTCCAGTATATGCAGAAGAATGGTTTCTGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGCTTCCTTTGTGATTTTCATATACATGTCTTTTGGAGACTTGAGGCCGAGCTTAAGGGAAGAACGAACCTTGTCTTTTGTGGAAAGAAATGGGACTCAGTTAATGTTAGATGGCAAACCTTTCTACATCAACGGGTGGAACTCATACTGGTTTATGGTTCAGTCTGTGGACGAATCTTCCAGACCCAGGGTTCGTGCCATGATTCAAGCAGGTGCGCAGATGGGTCTCACTGTTTGTAGAACTTGGGCTTTTAATGATGGGGACTACAACGCCCTTCAGATTTCCCCTGGTCGGTTCGATGAGCGAGTTTTTCAGGCCTTGGATTATGTCATAGCAGAAGCAAGGCAACATGGAATTCGGCTGCTCCTTGCCTTGGTCAATAACTTGCAAGCCTATGGTGGGAAGACTCAGTATGTCAAATGGGCATGGGAAGAGGGGATAGGGTTAAGCTCTTCCAATGATTCTTTCTTTTATGATCCATCAATCCGCAGTCATTTCAAGAATTATGTCAAGACTATTCTGACAAGGAAGAATACTATCACAGGAATTGAATATAGAAATGATCCCACCATATTAGGCTGGGAATTAATTAATGAACCTCGTTGCATGACCGATCCTTCAGGCGACACTCTCCAAGACTGGCTTGAAGAAATGTCTGCTTTTGTCAAATTGATAGACAAGAACCATTTGGTGACTATTGGCCTTGAAGGATTTTATGGTCCTAATGACCCAAGAGGCCCAGCTGTCAACCCGGAGGAGTGGGCATCCAGGCTTGGATCTGATTTTATTCGCAATTCTGGGATTGCGAATATTGATTTTACCTCTGTTCATATCTATCCTGACCATTGGTTAAAAACACAAGACTTTGAAGTGAACCTGAATTTTGTCTCCAAGTGGATGCGTTCACACATCGAAGATGGTGACAAAGAATTGAAGAAGCCTGTTTTGTTCTCTGAATATGGGTGGTCAGACCTGAACAAGAACTTTTCGGTATCTGACCGTGAAAAGATGTACAGAACAATTTTAGACATAATCTACAAATCTGCTAAGAAAAACGAGTCTGGAGCAGGTGCCTTAGTGTGGCAATTCTTAGTAGAAGGAATGAATGAGTTCGAGGATGATTTTTGGATGATCCCATGGAAAGGATCATCAACATATTCACTATTTCTTCAACAATCATGCAGATTGGCCAAAGTCACAGGATGGACTCAACAGGACAGAAGTTTCAAAGAGGCATGTAAGAAAGTTTGA 1404 0.4259 MLLSERSKYPNQSKKGVWESLQSPKSRWSSPSSICRRMVSGNGLFYPILGFASFVIFIYMSFGDLRPSLREERTLSFVERNGTQLMLDGKPFYINGWNSYWFMVQSVDESSRPRVRAMIQAGAQMGLTVCRTWAFNDGDYNALQISPGRFDERVFQALDYVIAEARQHGIRLLLALVNNLQAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSHFKNYVKTILTRKNTITGIEYRNDPTILGWELINEPRCMTDPSGDTLQDWLEEMSAFVKLIDKNHLVTIGLEGFYGPNDPRGPAVNPEEWASRLGSDFIRNSGIANIDFTSVHIYPDHWLKTQDFEVNLNFVSKWMRSHIEDGDKELKKPVLFSEYGWSDLNKNFSVSDREKMYRTILDIIYKSAKKNESGAGALVWQFLVEGMNEFEDDFWMIPWKGSSTYSLFLQQSCRLAKVTGWTQQDRSFKEACKKV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0893 467 Gene3D Glycosidases 75 451 - -
Prci6g0893 467 PANTHER - 47 459 IPR045053 GO:0004553
Prci6g0893 467 ProSitePatterns Glycosyl hydrolases family 5 signature. 243 252 IPR018087 GO:0004553|GO:0005975
Prci6g0893 467 SUPERFAMILY (Trans)glycosidases 76 442 IPR017853 -
Prci6g0893 467 Pfam Cellulase (glycosyl hydrolase family 5) 88 413 IPR001547 GO:0004553|GO:0071704
Prci6g0893 467 FunFam Mannan endo-1,4-beta-mannosidase 6 74 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0893 Prci-Chr6 6064057 6069078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0893 40 464 Glycoside Hydrolase AT2G20680 68.235 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0893 K19355 - gmx:100811461 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0893 6 6064057 6069078 Prci6g0893 6 6064057 6069078 ECH