Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0828 ATGGCTGATCAAGAGAACAGTGGTATTGGGGTCGCAAACGCCTTCACTCGGGTGGTCGAGGACTGTTCCTTCGACGTGTCGGATCTAAATTCTGCCGTGTCGAATGGCGTGGGGACGGCGGAGGAGAGAGCCGAAATGGGGATTTCGAGTTCTACTATCGAGCCAGAAATGAGAAGCGGTTATTTGCCGATTACTATGAAATCTATATGCGCTGTGAAGTTGGATGGAGAAGTGTTTGAAAATTTGGGGATTTCGAGTTGTACGCTTGACCAAGAAATGAGAAACGGTGCTGAGCCAATTGCTATGGAATCTACCCGTGCCTTGAAAGTGGATGGAGAAGCGTGTGAAAGTTTGGGGGTTTCGGGTGGTAATATTGAGGAAGGGATGGGAAGTATTAGTTTACCTGGCGGGCTTCAAAGTTCTGAGCAAGAAATGAGAAACGGTGCCGAGCTAATTGCTGTGGAATCTACTTCTATTGAGCAGGTGGATGGCGAAGTGCAAGAAAAATTGGGTTTTTCGGGTTTTAACAGTAATATTGAGGAAGGAGTGGGAAATATTAGTTTAGTTAGTGGGCTTGGAAGCTCTGTTATAATTGGAAAGAATGATGAGAAGAGCGAAATTAAGATGGATAAAGATGAAAGTGAAAGTTCAGATTCCGAGAGTGATAATCCATCTTCATCAACATCTGCATCTTCTAGTAGTAGCAGTGATAGTGACGATATCTCTACTAGTGGTGGTTCTAGTGATGATGACGATAGTGAGGAAGAGGAACGACAGGGAAAAGAAAAAATGACAGAAAAGATTGAAGTGGAAGTTGAAGAAGGTGAGATAAAAGACTCTGATGGGCAAGCGCTGGGCACTAACACTGCCGTCAGTGAAGACGATGATGACCTTGATGAAGATGCAGTGGAGGTTTCTTGGAGTGGCATTAATGATGAAGACGATGAAGATGGCATTACTACGGAAGGACCCATCAGGTCAAAGAACGAGATCAAGGATCTTCCTTCAGTTCCTCCAGTAAATGTGACCATAGAACCACACCATCAAATGCTTCCAGTGGGAGTTGTTTTGACGATAATCAGCTCCCAATTCATTGTGGAAGGGATGGAGAAGCATGATCCTCTTAATGAGGGGTCCATTCTCTGGATAACTGAAAGCCGAGCACCACTAGGGTTGGTTGACGAGATCTTTGGACCTGTGAAAAACCCTTACTATGTTGTGAGATACAATTCTGAAAATGAAATCCCCAGGGGTGTCCGTGTGGGTACTCCAATCTCTTTTGTTCCGGAATTTGCCAATCACGTGCTTAATAACAAGGATCTTTACAAGAAAGGCTATGATGCTTCTGGCTTGAATGATGAAGAGGTGTCCGATGAAGCAGAGTTTTCTGATGATGAGAAAGAGGCAGAATACAGGAAAACGAAAAGAGTGATGAAGAGAGGTGTTAGTGATAAGAACCATGGAAAGCATAAAAGCAACAAAAAGGAAGCTTCAAGGAAAAATGGCCCGGCAGTGCCTCCCTATCCCGTCCAACCTGCTTCTTCAACGCATAATCATGAAAAGTTTCCTCCATTTTCAGGCATCAGACCAGGTCCTTTTGAGGCAGCTCCAATTGTTCCACCTTTTCCACCTCCAAATGCGGGCCCTAATTTAGCTTCAAACGGAGTTTGGACAAACGGGATATCACTTGTACAGCCACAAACTGCTCTGTTTCCTAATGGCATATCTATGTTTCCAGGAAATGTACAAAATCCTTATCAGTTGCCAATGACAGGGATCCCATTTCAACAGCAGTTAGGTCCAAATCTAGGATCGCTTCCGCTTCCAGGAACCAGCTTGCCTGTACAACCCAATATATTTGCACAACCTATGTACCCCCGGGGGCTTGTCGGTCAAAATCAAATGACATTTGGGATGAACTTCCCGCAGATTCAGGCATCTGTTAGTAGTGGTGGAGAGCAAGTTTTTTTACCCTACGGAATGCAATCAGAAAGAAACCATAATTTTCAGTCTGGTCCAGACAATCTCCATCCTCCCAATCAATTTAGACCCGGTGGCTCTGCTAATCGTGGAAGGAAAACATTTCACCAAAGGGGAAGAAAAGGCTGGCGACCAACCAAGTGA 2124 0.4463 MADQENSGIGVANAFTRVVEDCSFDVSDLNSAVSNGVGTAEERAEMGISSSTIEPEMRSGYLPITMKSICAVKLDGEVFENLGISSCTLDQEMRNGAEPIAMESTRALKVDGEACESLGVSGGNIEEGMGSISLPGGLQSSEQEMRNGAELIAVESTSIEQVDGEVQEKLGFSGFNSNIEEGVGNISLVSGLGSSVIIGKNDEKSEIKMDKDESESSDSESDNPSSSTSASSSSSSDSDDISTSGGSSDDDDSEEEERQGKEKMTEKIEVEVEEGEIKDSDGQALGTNTAVSEDDDDLDEDAVEVSWSGINDEDDEDGITTEGPIRSKNEIKDLPSVPPVNVTIEPHHQMLPVGVVLTIISSQFIVEGMEKHDPLNEGSILWITESRAPLGLVDEIFGPVKNPYYVVRYNSENEIPRGVRVGTPISFVPEFANHVLNNKDLYKKGYDASGLNDEEVSDEAEFSDDEKEAEYRKTKRVMKRGVSDKNHGKHKSNKKEASRKNGPAVPPYPVQPASSTHNHEKFPPFSGIRPGPFEAAPIVPPFPPPNAGPNLASNGVWTNGISLVQPQTALFPNGISMFPGNVQNPYQLPMTGIPFQQQLGPNLGSLPLPGTSLPVQPNIFAQPMYPRGLVGQNQMTFGMNFPQIQASVSSGGEQVFLPYGMQSERNHNFQSGPDNLHPPNQFRPGGSANRGRKTFHQRGRKGWRPTK 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0828 707 MobiDBLite consensus disorder prediction 664 707 - -
Prci6g0828 707 MobiDBLite consensus disorder prediction 693 707 - -
Prci6g0828 707 MobiDBLite consensus disorder prediction 478 496 - -
Prci6g0828 707 MobiDBLite consensus disorder prediction 257 280 - -
Prci6g0828 707 Gene3D Probable tRNA pseudouridine synthase domain 322 428 IPR038664 -
Prci6g0828 707 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 292 642 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Prci6g0828 707 MobiDBLite consensus disorder prediction 220 243 - -
Prci6g0828 707 Pfam Gar1/Naf1 RNA binding region 352 433 IPR007504 GO:0001522|GO:0042254
Prci6g0828 707 MobiDBLite consensus disorder prediction 203 297 - -
Prci6g0828 707 SUPERFAMILY Translation proteins 350 413 IPR009000 -
Prci6g0828 707 MobiDBLite consensus disorder prediction 453 529 - -
Prci6g0828 707 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 322 428 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0828 K14763 - gmx:102660668 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0828 6 5717522 5720801 Prci6g0828 6 5717522 5720801 ECH