Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0820 ATGAGGCGAAGGGCGGCTGATTTTCGAAGGCCGGTAAGAAGGAGGGTTCCGGATGTTTTATGGTGGGCATTGTTCAGCGTAGTAGTTCTTCTCTTTATTTATGTCTTGAGCAAAGGGAATCAGGTTCAGTCTAGACCTGCTTTATACAAGAGAACGTACAAACATGATAGGATTCTGGAAGGCCTTAATATTACTGAAGAGATGTTGAGCCCCAACTCAGTGACCAGACAACTGAATGACCAGATATCCTTAGCAAAAGCTTTTGTTGTCATAGCAAAAGAAAGTAACAATCTTCAATTTGCTTGGGAATTAAGTGCCCAGATTCGCAATTCAAAGATTCTTCTCTCAAAGGCTGCTACAAGGCGTGCCCCTTTAACAACTATGGAATCAGAACATGCTATTCGTGATATGGCATTAATGCTATACCAGGCCCAGCAGCTGCATTATGACAGTGCAACAATGATCATGAGACTGAAAGCAAAAATTCAAACTCTTGAAGAACAATCGAGTTCTGTGTCTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGCCTATACTGCCTTGGTGTGCGGCTGACAACTGAATGGTTCAGAAACCTTAATCTGCAAAAGAAATTGATGGAAAAGAGGCAAGTGGAGATGAAGCTAAAAGACAACAATCTTTACCACTTTTGCGTGTTCTCTGATAACATCATTGCTACTTCAGTAGTGGTCAATTCAACTGCAATAAACTCTAAACATCCTGAAATGGTAGTTTTCCACCTCGTCACTGATGAAATAAATTATGCTGCGATGAAGGCATGGTTTGCCATGAACGACTTCCGTGGAGTGACTGTTGAGGTTCAGAAGTTTGAAGACTTCAGCTGGTTAAATGCTTCATATGTTCCAGTTCTTAAGCAACTCCAAGACTCAGAAATACAGAACTACTACTTTTCTGGCAATAGTGATGATGGCAAGACGCCAATCAAGTTTCGGAACCCTAAATATCTCTCCATGCTCAACCACCTAAGGTTTTATATTCCTGAAGTTTTTCCTGCACTAAAGAAGGTGGTGTTTCTTGATGATGATGTTGTGGTTCAGAACGATCTCTCTCCACTTTTCTCCATCGATTTGAATGGCAATGTTAACGGAGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATACCTGAATTACTCCCATCCTCTTATACGAGCACATTTTGATCCGGATGCGTGTGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAGGAACGTCACAGGCATCTACCACTACTGGCAGGAAAAGAATGTTGACCGGACATTATGGAAACTTGGTACCTTGCCACCTGGCCTGTTGACGTTTTATGGATTAACTGAACCCTTAGATCCGTTTTGGCATGTATTGGGATTCGGCTACACTACTGTTGATCCGCAGTTAGTAGAGAAAGGAGCTGTACTGCACTTCAATGGGAACTCCAAACCATGGCTGAAGATTGCAATTGAGAAGTATAAGCCTATGTGGGAGAAATATGTCGATTACTCTCATCCTTTATTGCAAAAATGCAACTTTCATTGA 1602 0.4132 MRRRAADFRRPVRRRVPDVLWWALFSVVVLLFIYVLSKGNQVQSRPALYKRTYKHDRILEGLNITEEMLSPNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSKILLSKAATRRAPLTTMESEHAIRDMALMLYQAQQLHYDSATMIMRLKAKIQTLEEQSSSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFRNLNLQKKLMEKRQVEMKLKDNNLYHFCVFSDNIIATSVVVNSTAINSKHPEMVVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFSGNSDDGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQNDLSPLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPFWHVLGFGYTTVDPQLVEKGAVLHFNGNSKPWLKIAIEKYKPMWEKYVDYSHPLLQKCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0820 533 Coils Coil 155 175 - -
Prci6g0820 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 66 532 IPR029993 GO:0047262
Prci6g0820 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Prci6g0820 533 CDD GT8_like_1 228 521 - -
Prci6g0820 533 Pfam Glycosyl transferase family 8 235 508 IPR002495 GO:0016757
Prci6g0820 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 528 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0820 Prci-Chr6 5667685 5672050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0820 1 533 Glycosyltransferase AT2G20810 80.224 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0820 K13648 - gmx:100792018 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0820 6 5667685 5672050 Prci6g0820 6 5667685 5672050 ECH