Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0785 ATGGCGGGGAAGATTGGGTTTGAAGACTTGCTGCCTGTGATGGCAAATAAGCTTGGAGGAGAAGGTCTGATAAAGGAGCTGTGTAATGGGTTTGAGTTGCTGATGGACAAAGACAGAGGAGTGATCACTCTGGACAGCTTGAGGAGAAACTCTGCTCTTCTGGGTCTTCAGGACTTGAAGGAGGATGAGCTATTGAGCATGATGAAGGAAGGCGATCTCGACGGCGACGGTGCTCTGTCTCAGATGGAGTTCTGCGTCCTCATGTTCAGATTAAGCCCTGATTTGATGAATCACTCTTGGGTTTGGCTCCAACAGGCTCTCCAAGATGAACTCGATCACTTCTCTTCCAAATGA 354 0.4859 MAGKIGFEDLLPVMANKLGGEGLIKELCNGFELLMDKDRGVITLDSLRRNSALLGLQDLKEDELLSMMKEGDLDGDGALSQMEFCVLMFRLSPDLMNHSWVWLQQALQDELDHFSSK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0785 117 ProSiteProfiles EF-hand calcium-binding domain profile. 59 94 IPR002048 GO:0005509
Prci6g0785 117 SUPERFAMILY EF-hand 3 103 IPR011992 -
Prci6g0785 117 Pfam EF-hand domain pair 39 90 IPR002048 GO:0005509
Prci6g0785 117 SMART efh_1 63 91 IPR002048 GO:0005509
Prci6g0785 117 Gene3D - 5 116 - -
Prci6g0785 117 PANTHER CALCIUM-BINDING PROTEIN KIC 4 113 IPR044205 GO:0005509
Prci6g0785 117 ProSitePatterns EF-hand calcium-binding domain. 72 84 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0785 Prci-Chr6 5274601 5275272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0785 7 111 EF-hand Containing Proteins AT4G27280 63.208 7.33e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0785 K24345 - gmx:100527206 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0785 6 5274601 5275272 Prci6g0785 6 5274601 5275272 ECH