Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0737 ATGGAGTACGGATACAAGGTGCGGGTGGCGTTTGCGATTGCTTCTTTGGCAGCTGTGTCAATCTATTTTACTGCTCGCTACCAGAGTCGGCGTAAGCGGACGTGTCCGCGGAGTTTGTGTTACTTACATGCCGAACCAAAGCCACAGTGTACTTTTAAGCGGGTATTAGCCGATAACTCGTACACTGTGTTCAAGCACTTGAAGCTCAATGACTCTAACGATGAGAGGCCTTCAAATTCCCATCCTTTTGAGGCAGAGATTACAGCATTATTGAAAAACCCTCAGCCTCAATTTGAATTCAGTACTGAGATTGAGGAACTGAAGAAGAAAGATACATATGTCTGGATTGATACAGAGTTGCAATTAAAGGAACTTGTCAATGTATTAAATAAAGAGAGGTTCTTTGCTGTGGACACAGAACAACATACTTTGCGATCTTTTCTTGGCTTCACAGCATTAATTCAGATTTCTACTCCGCAGGAGGATTATTTGATCGACACAATTGCCCTGCATGATTTAATGGGCATTCTTCGCCCAGTCTTTGCAAATCCTTTAATTTGTAAAGTGTTTCATGGAGCTGATAACGACATTGTCTGGCTACAGCGAGATTTTCATGTCTATGTTGTTAATCTCTTTGATACTTCAAAGGCATGTGAGGTGCTGTCGAAACCACAGAAATCACTTGCATATCTACTAGAAACTTATTGTGGTGTTACGACAAATAAATTATATCAGCGTGAAGACTGGAGACAACGTCCCCTCTCAGCAGCAATGATACATTATGCACAGACAGATGCACACTATTTGTTATATATTGCAAATTGTTTGATCACTGAGCTCAAACAGCTGGACGGTGAAAACTCTGGTTCCGATGACAAATTCCATTTTCTTCACGAGGCTAGTCGACGTTCCAACATGACTTGTTTGCAACTTTTCACAAAAGAGATTGAAGCTTCTCCTGGGGAATCTGCTGCATTGTCATTATTTTCACGATATGTGGGTGGTGAGAGTTCTCCAGTTTCCAGTGAAACCCAGTTTCAGAATTATGTGAGGCGACTATGTGCATGGAGAGATGTGATGGCTCGTGTCCATGATGAGAGCTTGAAATATGTATTATCAGACCAGGCAATTGTTGCTTTGGCAAATAAGCCTCCAACAAGTGACTCTGAAATATGCAATGGCATAGCTCAGGCTGATATCAATATAGAAATGGGTGTCAATTCTCTCTTCTCTTCTCCATCTCCTATTGTTGGTAGCCACCTTAGTGATGTCTATGATTTACTTACAGACAATTTAGCTAACACTGAAGATATTTATTCAGTGATTCTTCAGAAGTGCCTTGGTCCAAATGGGAGTTGTCCCATTTCTCTATTTAATTATTCTTTGTTGGTTAGCAGTAATCCGAGACCTATGATAGCCTATAAACATCATAGTGTAAAAAACTCGAAACAAGTTTCTCGGAAGGCTTCTCGAGATTTGTTTGTTCAGAAATTCTCCTGTAAATCTCCTGTTTATCATAATTGTCGGATCTATGCTAATGACGGGCGGCTGCTTTGTTACTGTGATAGGAGGAAGCTTGAATGGTATCTGAATCGGGATCTGGGAAAACTAATTGATGACGATCCACCTGCTATAATGCTTCTTTTTGAACCAAAAGGTCACCCAGAGGACGAAGACAATGATTTTTATATCCAGAGCAAGAAAAACATATGTGTTGGCTGTGGTGAAGGAAATCACTACTTGCGGTACCGGATAATCCCATCGTGCTATAGAATACATTTTCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCCTGCTTTGTGTGGACTGTCATGAAGTTGCTCATGCTGCTGCAGAGAAATACAAGAGAAAGATAGCAGCTGAATTTGGGATTCCTCTCTATGTTCAGAGGGTAATCGATCCAGGACAAGCATCTGAAGTAGCCTTTGAAGAGGGAGGTGTTTCTCCCTTACAGTTGCGAACAGCAGCCATGGCTCTTCTGCACCATGGACCAAGAATGCCTCCCAATCGCCGTGATGAACTGACTGAGACTGTGAAGAGGTACTATGGAGGGAGGGACATATCTGAAGAAGATTTAGAGAGAGCTTTGCTAGTTGGCATGAGTCCACATGAGAGAAGACGATTTGAGAAGAAGAGAGGATATTCATTTAAGCATTCAGTAAGAGGTACTGCTGTGGAGACAGTATATGAAAATCAAGGTGATTGCACGCCCACAATTGGGGTTGGGGACACATCAAATTTTAATGCTCTAGATGGTTCATCTGCAAATAAAGCAATAAGCAATGGATTAGGTAGAGAACTTATTATAGTAAAGGATGATGTCAGAAACCGCACAGTATCTTCTGATCTAGGAGTTAATGGAGCTGAACATGCAAGTGCTGATAAAAATTCAGATTCTAATGACCTAAGTGCTGCTGTAAATGCTGATGACAGTTGTCTAAGCGAAAGGGCTCCAAATGGAAGCGATGACTTATCTTTTAGAGATGAAGAGTCCGCTCAAGTGAAACATAATTCAAAGCTGTCACTCTTAGGACACGGACCACATGGGAAGCAAGTTGTTGAACATTTATTGAAGGAATACGGCGAGGACGGCATTCGTCAGTTTTGTCAGAGATGGAGACAAGTTTTTGTTGAAGCTGTCAAACCACGGTTTCTACCTGCTGGCTGGGACATAAATCACAGTGGTAGAAGGGATTTCGGTGAATTCAGTGTCTACAATCTGCTCAGACAGGGATCTGCTGCTATTGCTACTCGCAAGTGA 2790 0.4176 MEYGYKVRVAFAIASLAAVSIYFTARYQSRRKRTCPRSLCYLHAEPKPQCTFKRVLADNSYTVFKHLKLNDSNDERPSNSHPFEAEITALLKNPQPQFEFSTEIEELKKKDTYVWIDTELQLKELVNVLNKERFFAVDTEQHTLRSFLGFTALIQISTPQEDYLIDTIALHDLMGILRPVFANPLICKVFHGADNDIVWLQRDFHVYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVTTNKLYQREDWRQRPLSAAMIHYAQTDAHYLLYIANCLITELKQLDGENSGSDDKFHFLHEASRRSNMTCLQLFTKEIEASPGESAALSLFSRYVGGESSPVSSETQFQNYVRRLCAWRDVMARVHDESLKYVLSDQAIVALANKPPTSDSEICNGIAQADINIEMGVNSLFSSPSPIVGSHLSDVYDLLTDNLANTEDIYSVILQKCLGPNGSCPISLFNYSLLVSSNPRPMIAYKHHSVKNSKQVSRKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLNRDLGKLIDDDPPAIMLLFEPKGHPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKIAAEFGIPLYVQRVIDPGQASEVAFEEGGVSPLQLRTAAMALLHHGPRMPPNRRDELTETVKRYYGGRDISEEDLERALLVGMSPHERRRFEKKRGYSFKHSVRGTAVETVYENQGDCTPTIGVGDTSNFNALDGSSANKAISNGLGRELIIVKDDVRNRTVSSDLGVNGAEHASADKNSDSNDLSAAVNADDSCLSERAPNGSDDLSFRDEESAQVKHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIRQFCQRWRQVFVEAVKPRFLPAGWDINHSGRRDFGEFSVYNLLRQGSAAIATRK 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0737 929 SUPERFAMILY Ribonuclease H-like 47 312 IPR012337 -
Prci6g0737 929 SMART 35exoneu6 113 281 IPR002562 GO:0003676|GO:0006139|GO:0008408
Prci6g0737 929 Pfam 3'-5' exonuclease 113 280 IPR002562 GO:0003676|GO:0006139|GO:0008408
Prci6g0737 929 ProSiteProfiles HRDC domain profile. 343 423 IPR002121 GO:0003676
Prci6g0737 929 CDD Rrp6p_like_exo 109 302 - -
Prci6g0737 929 Gene3D HRDC domain 337 439 IPR044876 -
Prci6g0737 929 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 44 915 IPR045092 GO:0000175|GO:0000467
Prci6g0737 929 Pfam HRDC domain 350 390 IPR002121 GO:0003676
Prci6g0737 929 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 46 318 - -
Prci6g0737 929 SUPERFAMILY HRDC-like 346 437 IPR010997 GO:0000166|GO:0044237
Prci6g0737 929 MobiDBLite consensus disorder prediction 797 837 - -
Prci6g0737 929 Gene3D - 45 318 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0737 Prci-Chr6 4924179 4931796 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0737 K12951 - gmx:100791485 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0737 6 4924179 4931796 Prci6g0737 6 4924179 4931796 ECH